AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGNAAATCCGCGGAAT
TCCACACTCTTTACCATTATAATTTAGATAGCCTTTCCCTAGGCTTGAGA
GTCAGGTGATTTCAAATATTTTGTTATTAAAATGAATGCTAGCTTTCAAT
CAAGATAGGTTTGAGAGCTCCCAAGTAAACCATTTCACCCTGTCCTTGCA
CTCCCAATGCAGGTCACAGTACATGGTTGGTGAAAACCATGTCAAAAAAC
AGCCACACTTTAAAAATAATACTCCCAACTTTATGCATCATTAATCACAG
AAATACATAATCTCATTGGCCACCAGATCTGAAGTACACAGAAGCAGCCA
AAAATCAAACAGTGCAGGGTTATCATGGACAACTGAACAAACATGTCTGC
CATGTGTGGCTGGGCATGAGGTACGTTGTGCACCCGGGGCTGCCATTTCA
AGGCCCTTAACCACATTACTACTTGAACCCCAAGAGGAAAGCTTCCTTAT
GTGGAAACCAGAATCTACAACTTGTGAGTAAGTCAGTTCCTGCTCAGGAG
CCTCTGGGGCCTGTGTCTCACAAGCATGCTGTCTTCAAAAAAAGGCCTTT
CCTTTCCACTCCAAGTTGCAAAAGAAAAAGGTTGGAAGATATGGAAAACC
AGGCCCCCAATAATAAACCTGTTATGTCTTGTTAATCCTCTCTGACAAAC
CCTTGACCCAACCTTTGTTAAAAAGATTTCTCTCCGTCCTACCGGTGCGA
AATTCCCTCAACATACTTTGCCGCCCATATACAATGAAATTGCGCTCCCC
CCTGTATTTAACTTCTCTTTTG

CATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAATCCTGGAATTATAAAATGTGATCA
AAAGCCCGTGTCTGGGGTGGTCATAGGCTCTATGGGGAAAACCTATTGTT
TTGTTATGTGGATACATTATCAAACTACATACCTTCTGAATATTTATGTT
AATATCCATAGATCAGTGTTGCTATTAGTTTTAGTTACGGGAGCTTATGT
TTGCAGTGATAACAGTAAATGAAGAGACTCATGGCTATTCAAAGTGCTGA
GAGTAAGTGACTGTTGAGACATTTATTGGGAGTGTTGTTGAGTCCTAAAT
GGGGCATCTCTATCCCTCCACTCCAGAGGTTAGGATACACGGATGTAAAC
AGGATGTAAGATCTGGAAGATGGGAAGGAATGATGTCAACGCTGTCTTCT
GGACATGACATGCCCGTTGTACCCATGGGCCCACAGTGTCAGTGGCTACT
TGTACATTACCTTTCCATGTCTTGGGCCATTAACATTTCACCCCGATTGT
CGGAGAGCCGACTTGATATAAAACTTTTTTTCACGGTTTAATGGCCAAAT
GCTATAAAACCTTCTGCTCCCTTCTATTAACTTTTCTCTCTTTTTTATCC
CCTCTTTTCTTCCCCCTGATGCTTTTCTCTTTTTTTTCCCTTCCCCCACC
CGCCTTTTTTCTCCTTTTCTCTCCCCTTCTTCTTTTTTATTTTTTCCTCC
TTTTTTTTTTTTTCCCCCTTTTTCCTCCTTATCCCCA

Query= MSMg01no417_m24.b1 MSMg01no417_m24.b1 CHROMAT_FILE:
MSMg01no417_m24.b1 PHD_FILE: MSMg01no417_m24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:49 2005
         (493 letters)



>mm_chr12_12558252_12559146
          Length = 895

 Score =  870 bits (450), Expect = 0.0
 Identities = 481/496 (96%), Gaps = 10/496 (2%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccacactct-----ttaccattataatttagatagcctttccctaggcttgaga 58
           |||||||||||||||     |    ||||||||||| |||||||||||||||||||||||
Sbjct: 204 ggaattccacactctgagaat----attataatttacatagcctttccctaggcttgaga 259

                                                                       
Query: 59  gtcaggtgatttcaaatattttgttattaaaatgaatgctagctttcaatcaagataggt 118
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gttaggtgatttcaaatattttgttattaaaatgaatgctagctttcaatcaagataggt 319

                                                                       
Query: 119 ttgagagctcccaagtaaaccatttcaccctgtccttgcactcccaatgcaggtcacagt 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttgagagctcccaagtaaaccatttcaccctgtccttgcactcccaatgcaggtcacagt 379

                                                                       
Query: 179 acatggttggtgaaaaccatgtcaaaaaacagccacactttaaaaataatactcccaact 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acatggttggtgaaaaccatgtcaaaaaacagccacactttaaaaataatactcccaact 439

                                                                       
Query: 239 ttatgcatcattaatcacagaaatacataatctcattggccaccaga-tctgaagtacac 297
           |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 440 ttatgcatcattaatcacagaaatacataatctcattggccaccggaatctgaagtacac 499

                                                                       
Query: 298 agaagcagccaaaaatcaaacagtgcagggttatcatggacaactgaacaaacatgtctg 357
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 500 agaagcagccaaaaatcaaacagtgcagggttaccatggacaactgaacaaacatgtctg 559

                                                                       
Query: 358 ccatgtgtggctgggcatgaggtacgttgtgcacccggggctgccatttcaaggccctta 417
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccacgtgtggctgggcatgaggtacgttgtgcacccggggctgccatttcaaggccctta 619

                                                                       
Query: 418 accacattactacttgaaccccaagaggaaagcttccttatgtggaaaccagaatctaca 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 accacattactacttgaaccccaagaggaaagcttccttatgtggaaaccagaatctaca 679

                           
Query: 478 acttgtgagtaagtca 493
           ||||||||||||||||
Sbjct: 680 acttgtgagtaagtca 695


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 895
Length adjustment: 10
Effective length of query: 483
Effective length of database: 885
Effective search space:   427455
Effective search space used:   427455
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)