Query= MSMg01no418_e19.b1 MSMg01no418_e19.b1 CHROMAT_FILE:
MSMg01no418_e19.b1 PHD_FILE: MSMg01no418_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:28 2005
(341 letters)
>mm_chr12_111610953_111611693
Length = 741
Score = 565 bits (292), Expect = e-165
Identities = 318/327 (97%)
Strand = Plus / Minus
Query: 1 tctgttgtgttcttgatcccgccttcatggctggnctggccctcgggctgtcaggggagt 60
||||||| | ||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 527 tctgttggggtcttgattccgccttcatggctggcctggccctcgggctgtcaggggagt 468
Query: 61 ggtatgtctttaaagcagcgattggcttggttctgctctggcttttcagggtctgggggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ggtatgtctttaaagcagcgattggcttggttctgctctggcttttcagggtctgggggc 408
Query: 121 cccaggagaagcctccagagggcaccccttcacaccatacactgttccttccacagactc 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 407 cccaggagaagcctccagagggtaccccttcacaccatacactgttccttccacagactc 348
Query: 181 tcactggtcccggggaggggtgtggttatgcttccttcccaggtagagaaactgagtctg 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tcactggtcccggggcggggtgtggttatgcttccttcccaggtagagaaactgagtctg 288
Query: 241 gagggggcagctctgagagacagtcttgatcatggctaggctcggcgaattgactctgag 300
||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||
Sbjct: 287 gagggggcagctctgagagacagccgtgagcatggctaggctcggcgaattgactctgag 228
Query: 301 cattgttattgttgttaggtttttttt 327
|||||||||||||||||||||||||||
Sbjct: 227 cattgttattgttgttaggtttttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_e19.g1 MSMg01no418_e19.g1 CHROMAT_FILE:
MSMg01no418_e19.g1 PHD_FILE: MSMg01no418_e19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:28 2005
(383 letters)
>mm_chr12_111441749_111442530
Length = 782
Score = 683 bits (353), Expect = 0.0
Identities = 375/387 (96%), Gaps = 9/387 (2%)
Strand = Plus / Plus
Query: 1 tgccctttgaagccattctatgggcagtgatctccacttctccctgacattatgtaagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgccctttgaagccattctatgggcagtgatctccacttctccctgacattatgtaagtc 260
Query: 61 accacaccttcacactccctgaccccatgggtgtcgggagactgttatgacacaattcaa 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accacacctccacactccctgaccccatgggtgtcgggagactgttatgacacaattcaa 320
Query: 121 agcaggacctcgggactctgcagccatgatggcaactctttggtcatggacatacatact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcaggacctcgggactctgcagccatgatggcaactctttggtcatggacatacatact 380
Query: 181 acctctggggcacttctgaactttacattattttt----gtatcaaagctaagggacttg 236
|||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 381 acctctggggcacttctgaactttacatta-----acgggtagcaaagctaagggacttg 435
Query: 237 ccaaagacacacccttgtaaggaacagacaagacccagcccaggctttctacctcagccc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ccaaagacacacccttgtaaggaacagacaagacccagcccaggctttctacctcagccc 495
Query: 297 cacagggtgcctatggctgaatcatcgcgctgccagacaaggtcgttgagccacccagga 356
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cacagggtgcctatggctggatcatcgcgctgccagacaaggtcgttgagccacccagga 555
Query: 357 acaccctattctggttcaaccatcctg 383
|||||||||||||||||||||||||||
Sbjct: 556 acaccctattctggttcaaccatcctg 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 782
Length adjustment: 9
Effective length of query: 374
Effective length of database: 773
Effective search space: 289102
Effective search space used: 289102
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
