Query= MSMg01no420_d15.b1 MSMg01no420_d15.b1 CHROMAT_FILE:
MSMg01no420_d15.b1 PHD_FILE: MSMg01no420_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:00 2005
(254 letters)
>mm_chr12_95499663_95500316
Length = 654
Score = 468 bits (242), Expect = e-136
Identities = 251/254 (98%)
Strand = Plus / Minus
Query: 1 gtttctaaagcccaatttaaagccctcaacattccttgctatcttcatattctgcaccac 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 454 gtttctaaagcccaatttaaagccctcaacatcccttgctatcttcatattctgtaccac 395
Query: 61 ctccagtcatcaggaaagatagaacggactaacccttcttttaaaaacacccctctcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctccagtcatcaggaaagatagaacggactaacccttcttttaaaaacacccctctcaaa 335
Query: 121 ctgccacaggaacttcacctctgttgggtaaaacttctactgctggctctcttcaggctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctgccacaggaacttcacctctgttgggtaaaacttctactgctggctctcttcaggctg 275
Query: 181 tgggttttctccatgtgacctctttacatctcaccctttgagcttttgtatggatgacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tgggttttctccatgtgacctctttacatctcaccctttgagcttttgtatggatgacca 215
Query: 241 gtccgactcccaga 254
||| ||||||||||
Sbjct: 214 gtctgactcccaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space: 158025
Effective search space used: 158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no420_d15.g1 MSMg01no420_d15.g1 CHROMAT_FILE:
MSMg01no420_d15.g1 PHD_FILE: MSMg01no420_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:00 2005
(454 letters)
>mm_chr12_95297128_95297981
Length = 854
Score = 480 bits (248), Expect = e-139
Identities = 273/284 (96%), Gaps = 6/284 (2%)
Strand = Plus / Plus
Query: 173 agcacagt--gtgtactgaatgttgacaaacccgctgtggtaaatctcatacgggacctt 230
|||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 375 agcacagttagtg----gaatgttgacaaacacgctgtggtaaatctcatacgggacctt 430
Query: 231 gctgcctttcacaagcagaggaagatgaaagggaacctcagtcttgccgctgggaatctt 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gctgcctttcacaagcagaggaagatgaaagggaacctcagtcttgccgctgggaatctt 490
Query: 291 tcctggcttcagcacatctatggagctgttgataatctggatcggcttcatagagctgta 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcctggcttcagcacatctatggagctgttgataatctggatcggcttcatagagctgta 550
Query: 351 aaaggcttcgaacacacccgcaattttgccactgaggatctgcaggtttacagatacctt 410
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aaaggcttcgaacacacccacaattttgccactgaggatctgcaggtttacagatacctt 610
Query: 411 cttttgtcaaagagactccctggtgatggactgagtccttgcta 454
||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 611 cttttgtcaaagagactccctggtgctggtttgagtccttgcta 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
