Query= MSMg01no422_b18.b1 MSMg01no422_b18.b1 CHROMAT_FILE:
MSMg01no422_b18.b1 PHD_FILE: MSMg01no422_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:29 2005
(583 letters)
>mm_chr12_55027047_55028029
Length = 983
Score = 1091 bits (564), Expect = 0.0
Identities = 575/579 (99%)
Strand = Plus / Minus
Query: 5 gaattcaaaactattctatgacagaaaaagagaaacagaattcatgcaaatcatattaat 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gaattcaaaactaatctatgacagaaaaagagaaacagaattcatgcaaatcatattaat 724
Query: 65 tccaacatttccccagtgagctgggtataaactacagcctaattaaatattttttaacga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tccaacatttccccagtgagctgggtataaactacagcctaattaaatattttttaacga 664
Query: 125 tgtgagtaatttttgccaaggggcggattcaggggaaaatttaatatgagatcacaaaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tgtgagtaatttttgccaaggggcggattcaggggaaaatttaatatgagatcacaaaag 604
Query: 185 ctgttcccagcgttgattctgtaaattaatgactatctgccttatgataaaaacatgctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ctgttcccagcgttgattctgtaaattaatgactatctgccttatgataaaaacatgctg 544
Query: 245 ctaagaatgagaatgaagtcggcaaagcttgctctatttgtctaacaaccagacatacag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ctaagaatgagaatgaagtcggcaaagcttgctctatttgtctaacaaccagacatacag 484
Query: 305 aatgcaaacctttaaaggcaacgggacatttcccattgtgtcagtgacacatctaggata 364
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aatgcaaacctttaaaggcaatgggacatttcccattgtgtcagtgacacatctaggata 424
Query: 365 gagacacaccatgcccacaaatgaatggctggctttaaggcgctctcgacagtgtgggat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gagacacaccatgcccacaaatgaatggctggctttaaggcgctctcgacagtgtgggat 364
Query: 425 cctctttaggtagctgctgtctaggtccagaaatatatttttaaagcagctggtttgttc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cctctttaggtagctgctgtctaggtccagaaatatatttttaaagcagctggtttgttc 304
Query: 485 acaaattactgcatcccgtctccaaaagagattcaaggtggtttacaataagagagacat 544
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 303 acaaattactgcatcccgtctccaaaggagattcaaggtggtttacaataagagagacat 244
Query: 545 acnagaaggcaacaacgttgaaggcaaaattgaaggtga 583
|| ||||||||||||||||||||||||||||||||||||
Sbjct: 243 acaagaaggcaacaacgttgaaggcaaaattgaaggtga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_b18.g1 MSMg01no422_b18.g1 CHROMAT_FILE:
MSMg01no422_b18.g1 PHD_FILE: MSMg01no422_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:29 2005
(541 letters)
>mm_chr12_54925668_54926608
Length = 941
Score = 957 bits (495), Expect = 0.0
Identities = 536/565 (94%), Gaps = 24/565 (4%)
Strand = Plus / Plus
Query: 1 agtaatatacacagacaatgtaattagcctaacattcctcaatagtaactattaagtgat 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 agtaatatatacagacaatgtaattagcctaacattcctcaatagtaactattaagtgat 236
Query: 61 ctgaatattggtccctgcaccatgtactctaataataaatgtaatgtatatgtgttagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ctgaatattggtccctgcaccatgtactctaataataaatgtaatgtatatgtgttagta 296
Query: 121 atagtttattttatatatatatat------------------------gcacatttaaaa 156
|||||||||||||||||||||||| ||||||||||||
Sbjct: 297 atagtttattttatatatatatatatatatatatatatatatatatatgcacatttaaaa 356
Query: 157 tactttctagaaatctacaggatatcaaataacatttggtttttttctttccgttacttt 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tactttctagaaatctacaggatatcaaataacatttggtttttttctttccgttacttt 416
Query: 217 tcaaagccaacaacttaacacatggctctctctgtgtgaccaagtgccatgtgttttgcc 276
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 417 tcaaagccaacaacttaacacatggcactctctgtgtgaccaagtgccatgtgttttgcc 476
Query: 277 aaagcagagcagtgatatttttaggtcttttaggaccagaataatgtactattgtgttac 336
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 aaagcagagcagtaatatttttaggtcttttaggaccagaataatgtactattgtgttac 536
Query: 337 tcttgccaagggaaggttcctccattaacttgaaagagatctctgaattcctggggaatg 396
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 537 tcttgccaagggaaggttcctccgttaacttgaaagagatctctgaattcctggggaatg 596
Query: 397 atggatttggtccctgaactctgatctggttacctttgcattaattaacacatcacatga 456
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 atggatttgggccctgaactctgatctggttacctttgcattaattaacacatcacatga 656
Query: 457 gcaagaggagacaaggaaagggaccagtgaatatctatgcaggaactgatagtcccctgt 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gcaagaggagacaaggaaagggaccagtgaatatctatgcaggaactgatagtcccctgt 716
Query: 517 gacacacactgtcaagcatgtcctg 541
|||||||||||||||||||||||||
Sbjct: 717 gacacacactgtcaagcatgtcctg 741
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
