Query= MSMg01no426_d14.b1 MSMg01no426_d14.b1 CHROMAT_FILE:
MSMg01no426_d14.b1 PHD_FILE: MSMg01no426_d14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:41 2005
(579 letters)
>mm_chr12_29844731_29845709
Length = 979
Score = 1081 bits (559), Expect = 0.0
Identities = 571/575 (99%)
Strand = Plus / Plus
Query: 5 gaattctctggtgtgttaccatatacttgtaatcctggagctggggaagtggagacagga 64
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctggtgtggtagtatatacttgtaatcctggagctggggaagtggagacagga 264
Query: 65 gaatcccattgactgaccagacagagtaacttacttgacaaaggggcttctgaagaaaga 124
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaataccattgactgaccagacagagtaacttacttgacaaaggggcttctgaagaaaga 324
Query: 125 catttgaggctctccactaacccctccgtgtacatgtgccttctcctctgcccttcacat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catttgaggctctccactaacccctccgtgtacatgtgccttctcctctgcccttcacat 384
Query: 185 acacatatacatgtatatgcacatgtactctccacatgtacattcacatttacacaaatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acacatatacatgtatatgcacatgtactctccacatgtacattcacatttacacaaatg 444
Query: 245 ggcacacatgtacatatgtacccatgcgtatctacatgtgtatccatatacacaaaacac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggcacacatgtacatatgtacccatgcgtatctacatgtgtatccatatacacaaaacac 504
Query: 305 atgtacatgtacactcttatacatgtgcgtacacatatgtacatatacaccctcatacaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgtacatgtacactcttatacatgtgcgtacacatatgtacatatacaccctcatacaa 564
Query: 365 gcatgcacatgtttatgtacacccatgcacagctgcatgtacacccacacacatgctcac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcatgcacatgtttatgtacacccatgcacagctgcatgtacacccacacacatgctcac 624
Query: 425 acacatatatacactcacatacacagatatacatatatacatttacatatcacaatatat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acacatatatacactcacatacacagatatacatatatacatttacatatcacaatatat 684
Query: 485 gcatttgtatccacacatacacatgtacatgtgtatctttcaaacacacatgtgcatgta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcatttgtatccacacatacacatgtacatgtgtatctttcaaacacacatgtgcatgta 744
Query: 545 tcctccctcatacacatgtacatgcatgcacaatg 579
|||||||||||||||||||||||||||||||||||
Sbjct: 745 tcctccctcatacacatgtacatgcatgcacaatg 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_d14.g1 MSMg01no426_d14.g1 CHROMAT_FILE:
MSMg01no426_d14.g1 PHD_FILE: MSMg01no426_d14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:41 2005
(463 letters)
>mm_chr12_30022622_30023483
Length = 862
Score = 857 bits (443), Expect = 0.0
Identities = 458/463 (98%), Gaps = 1/463 (0%)
Strand = Plus / Minus
Query: 1 taggctttgtgtagtcatacgatttagtgctggcttctctgtgaagcacagctgaagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 taggctttgtgtagtcatacgatttagtgctggcttctctgtgaagcacagctgaagagt 757
Query: 61 caaagcccttgtgagaatctgaaggcagtgtgattacaaggtgtgtttgacgctagtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 caaagcccttgtgagaatctgaaggcagtgtgattacaaggtgtgtttgacgctagtgtg 697
Query: 121 gagtacacagcaagaccctgctataaaaacaaaataaaatactgctatcctattagtcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gagtacacagcaagaccctgctataaaaacaaaataaaatactgctatcctattagtcga 637
Query: 181 ctagagtttcccatgaaatgctaaaaaaaaaaaaaaatcctcattgagaacattccaagt 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 636 ctagagtttcccatgaaatgct-aaaaaaaaaaaaaatcctcattgagaacattccaagt 578
Query: 241 gcaacaggaacctgtatattaaggaccagtatgagggaaagagggaaggagaggaataac 300
|||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gcaacaggaacctggagaagaaggaccagtatgagggaaagagggaaggagaggaataac 518
Query: 301 ctgccaggcacaggaggaaggggaaagacatgctcttccagccaccaactattcatctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ctgccaggcacaggaggaaggggaaagacatgctcttccagccaccaactattcatctac 458
Query: 361 tcatcatgactgggtggtgtcctgggactttattaatgtcaccaaattgaaacttaggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tcatcatgactgggtggtgtcctgggactttattaatgtcaccaaattgaaacttaggga 398
Query: 421 cacctttctaacaggtatggctacatacaaatgaggggactta 463
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cacctttctaacaggtatggctacatacaaatgaggggactta 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 862
Length adjustment: 10
Effective length of query: 453
Effective length of database: 852
Effective search space: 385956
Effective search space used: 385956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
