Query= MSMg01no431_c05.b1 MSMg01no431_c05.b1 CHROMAT_FILE:
MSMg01no431_c05.b1 PHD_FILE: MSMg01no431_c05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:19 2005
(488 letters)
>mm_chr12_26644184_26645071
Length = 888
Score = 872 bits (451), Expect = 0.0
Identities = 471/481 (97%), Gaps = 6/481 (1%)
Strand = Plus / Minus
Query: 1 cataaagccaagtgaagtatcacatttacagtcccaatgttcatatggggaaacaggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cataaagccaagtgaagtatcacatttacagtcccaatgttcatatggggaaacaggagg 422
Query: 61 actcctagaaattcacaaatcagctgttctggcatccacagtagtaaagaagaaagagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 actcctagaaattcacaaatcagctgttctggcatccacagtagtaaagaagaaagagat 362
Query: 121 attgcctcgaacaaagtggataattagaactgactctcaagattgtatttgacctccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attgcctcgaacaaagtggataattagaactgactctcaagattgtatttgacctccaac 302
Query: 181 tgtccatttacactccacagaagaatatacatatacacatatgtatactctcacattctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtccatttacactccacagaagaatatacatatacacatatgtatactctcacattctg 242
Query: 241 caaacacatgtactcttcttcctacagacagacagacagttacacacacacacacacaca 300
||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaacacatgtacacatcagcctacagacagacagacagttacacacacacacacacaca 182
Query: 301 cacacacacacaca------gtggtacagacatattctcagatgccatctgactcctatc 354
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cacacacacacacacacacagtggtacagacatattctcagatgccatctgactcctatc 122
Query: 355 actgactgagaaaggcaagagttgaatggctataacaggtaacagggttgtttcaggggt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actgactgagaaaggcaagagttgaatggctataacaggtaacagggttgtttcaggggt 62
Query: 415 agaggtcagaggttatagagattctctgaggccaagggggatctccatcctcaggttttt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaggtcagaggttatagagattctctgaggccaagggggatctccatcctcaggttttt 2
Query: 475 g 475
|
Sbjct: 1 g 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_c05.g1 MSMg01no431_c05.g1 CHROMAT_FILE:
MSMg01no431_c05.g1 PHD_FILE: MSMg01no431_c05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:19 2005
(248 letters)
>mm_chr12_26481189_26481836
Length = 648
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1 agttaatggacataagctatgaaacagatagaaatcaaattgattttctgtcatttttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttaatggacataagctatgaaacagatagaaatcaaattgattttctgtcatttttta 260
Query: 61 tttgtttttttgtgagggataagtgcataaaatatattaaatattgaaatatacaatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtttttttgtgagggataagtgcataaaatatattaaatattgaaatatacaatcca 320
Query: 121 ttgtgaagttccatggcttcaaaatcactattcaaacagtatagaacttcactaggatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtgaagttccatggcttcaaaatcactattcaaacagtatagaacttcactaggatgc 380
Query: 181 acagatgtgagtctgggtatttttttgctgtgtacagtttttgttatttgtttttttatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagatgtgagtctgggtatttttttgctgtgtacagtttttgttatttgtttttttatt 440
Query: 241 ttttttta 248
||||||||
Sbjct: 441 ttttttta 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
