Query= MSMg01no432_i22.b1 MSMg01no432_i22.b1 CHROMAT_FILE:
MSMg01no432_i22.b1 PHD_FILE: MSMg01no432_i22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:19 2005
(135 letters)
>mm_chr12_117662633_117663166
Length = 534
Score = 234 bits (121), Expect = 2e-66
Identities = 127/129 (98%), Gaps = 1/129 (0%)
Strand = Plus / Plus
Query: 5 gaattcagagccatttatctgttattttggctgtgatttcttttttctgatttgttgtat 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagagccattgat-tgttattttggctgtgatttcttttttctgatttgttgtat 263
Query: 65 tcaagattgtcttgtatctgctgtaggtcttgccagagaatgttgtgtcatagtggtggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcaagattgtcttgtatctgctgtaggtcttgccagagaatgttgtgtcatagtggtggg 323
Query: 125 gtggggtgg 133
|||||||||
Sbjct: 324 gtggggtgg 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 135
Length of database: 534
Length adjustment: 8
Effective length of query: 127
Effective length of database: 526
Effective search space: 66802
Effective search space used: 66802
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no432_i22.g1 MSMg01no432_i22.g1 CHROMAT_FILE:
MSMg01no432_i22.g1 PHD_FILE: MSMg01no432_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:19 2005
(419 letters)
>mm_chr12_117828097_117828916
Length = 820
Score = 804 bits (416), Expect = 0.0
Identities = 419/420 (99%), Gaps = 1/420 (0%)
Strand = Plus / Minus
Query: 1 aaagcgaatatactagtgcctctatttctactgtcttatgcttacccttttctcttg-aa 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 620 aaagcgaatatactagtgcctctatttctactgtcttatgcttacccttttctcttgaaa 561
Query: 60 aaaaaatgtttgttcaacaggcttgcaggaaccaagcaaaaggtttctgctgtgtatgta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaaaaatgtttgttcaacaggcttgcaggaaccaagcaaaaggtttctgctgtgtatgta 501
Query: 120 tcaagtggatggactcagggacacggaaccctgccaggcccagataggtggagattttac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcaagtggatggactcagggacacggaaccctgccaggcccagataggtggagattttac 441
Query: 180 atccactatccattaaaatccctcagactttttctgttgaaatggaccaagactttgatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atccactatccattaaaatccctcagactttttctgttgaaatggaccaagactttgatt 381
Query: 240 aaaaggataacaaaatccaaaaacttgtctctatagcagccagcttgtaaaatgtaatag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaaaggataacaaaatccaaaaacttgtctctatagcagccagcttgtaaaatgtaatag 321
Query: 300 accttccatgctaataacagaagcaacatctcacacattagaaggggctccttaatgaac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 accttccatgctaataacagaagcaacatctcacacattagaaggggctccttaatgaac 261
Query: 360 tcacactttatctacatatctaccctttgttttgctgtgtgtgtggcactctatgtgtat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcacactttatctacatatctaccctttgttttgctgtgtgtgtggcactctatgtgtat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 820
Length adjustment: 9
Effective length of query: 410
Effective length of database: 811
Effective search space: 332510
Effective search space used: 332510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
