XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTA
TTGCATTTCAGTATTAATTAAACGTGCTTCCTAATTTTCTTAGGAAAATA
GGAATATTATGTATTTCCTAGGTCTGTCTCTTCCAAAGTCATATACTCAA
GGCCAATTATGAAGTCATACATATGGTTATTTGTATTTATATTCATGAAC
ATATTTCGTATTCAAACAGATAACAAACTAAGATAAATGTCTAGGTTTTT
TTTTCTCCCTCTTGTATCACTAAATATCCTTAATGTCAGCATTTCATGCA
GACACAGAAGTGATGTTTGTGCTGCATTTCTCGTGTAAAGAAGGAAGCAG
CCCTGTTCAAATACAGACAGTGACTTTCTTATAAACACAGATAAATAACC
AGAGGGGACTTTGCAGAACGGTGTTCTTAACCTGACTGACGATGCCTCTG
TCGCAGGCTGACACTGTGCGAGACACTTCTGTCTCTTAGNAGGTCAGTCA
AAATCCTATCCCCATTTGCATCCTTAGCTGGAAACTTGAAGTGGCTTATC
AAAGAATACAAATCTATTTTTATAGAGAAATCTAGAAATTTACAAACCCC
TCTTTCCATTAAAGTTTTTTTTGAATTTGGAACCAGGGTCTTCTTGTAGT
CGTCTACGCAAATAATCCTAACATTCCCCCCCTTTCTTTTTTCCGGTTGG
AGTTTAAAAGGGTTTCTCTTTTCCTGGCCTAACCAGACCCTTTTCGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCTTGCAAGATCCAGGTATCAACAAGATATAAAA
GCTTCGTGATGACTCTTGTGCCATGTACCCTGAATCTATGGTCTAAGTAT
ACATGTGAAGGGGTGGAGCTATGAGCTGGGACGGAGTGAAGCCAGAAGGA
GTAGTGCTATATTTTACTAGTGATGGTTCCATATGAATGTATACAGATCC
AAAACTACATAAGGTTATGGACACACTCACTCAACTGAGCATGTAAAAAA
TAAGTTAGGTTTCAGTATGGCATACCAATGTGTCACGACTGTCTAATATC
ATACTACAGATAGTCGACAACTGGGTTAAAGACACTGCAACCTATCACCA
CTGGTTTGGCAACCCTCTTTGAATCAGTTATTTCAAAACAGAGGCAACAG
TAGAGGCTCCAAGCTGGAATCATTAATTTGGTGAGTGTGCTTTGTTTTGG
ATTTTGTGACTCACATGGNCACAGAGCGGCAAATGTAGCTAACAGTATGG
ATCCTTGATGGCCTTTACAAGGCTTTTTTTATTTCCGCACCCCTGGATCT
TCTTCTTGTTAGATGACCGTTCTTGCTTCTACGATCTCTTTATCCCTCCA
CTCTTTTCTTTGACTTTTTCTTGCTATTCCTGGCTTTGTTTTTTCCTCTT
CTCTTATGTCCCCCTTCGCCTTTTTCCTTCTCCCTCCTG

Query= MSMg01no433_b05.b1 MSMg01no433_b05.b1 CHROMAT_FILE:
MSMg01no433_b05.b1 PHD_FILE: MSMg01no433_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:03 2005
         (447 letters)



>mm_chr12_119698334_119699180
          Length = 847

 Score =  828 bits (428), Expect = 0.0
 Identities = 440/444 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctattgcatttcagtattaattaaacgtgcttcctaattttcttaggaaaatag 63
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 204 ggaattctattgcatttcagtattaattaaatgtgcttcctaattttcttaggaaaatag 263

                                                                       
Query: 64  gaatattatgtatttcctaggtctgtctcttccaaagtcatatactcaaggccaattatg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaatattatgtatttcctaggtctgtctcttccaaagtcatatactcaaggccaattatg 323

                                                                       
Query: 124 aagtcatacatatggttatttgtatttatattcatgaacatatttcgtattcaaacagat 183
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 324 aagtcatacatatggttatttgtatttatattcatgaacatatttcatattcaaacagat 383

                                                                       
Query: 184 aacaaactaagataaatgtctaggtttttttttctccctcttgtatcactaaatatcctt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aacaaactaagataaatgtctaggtttttttttctccctcttgtatcactaaatatcctt 443

                                                                       
Query: 244 aatgtcagcatttcatgcagacacagaagtgatgtttgtgctgcatttctcgtgtaaaga 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatgtcagcatttcatgcagacacagaagtgatgtttgtgctgcatttctcgtgtaaaga 503

                                                                       
Query: 304 aggaagcagccctgttcaaatacagacagtgactttcttataaacacagataaataacca 363
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 504 aggaagcagccctgttcaaatacagacagcgactttcttataaacacagataaataacca 563

                                                                       
Query: 364 gaggggactttgcagaacggtgttcttaacctgactgacgatgcctctgtcgcaggctga 423
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaggggactttgcagaacagtgttcttaacctgactgacgatgcctctgtcgcaggctga 623

                                   
Query: 424 cactgtgcgagacacttctgtctc 447
           ||||||||||||||||||||||||
Sbjct: 624 cactgtgcgagacacttctgtctc 647


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space:   365769
Effective search space used:   365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no433_b05.g1 MSMg01no433_b05.g1 CHROMAT_FILE:
MSMg01no433_b05.g1 PHD_FILE: MSMg01no433_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:04 2005
         (442 letters)



>mm_chr12_119874004_119874845
          Length = 842

 Score =  824 bits (426), Expect = 0.0
 Identities = 438/442 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttgcaagatccaggtatcaacaagatataaaagcttcgtgatgactcttgtgccatgta 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 642 cttgcaagatccaggtatcaacaagatataaaagcttcgtgatgagtcttgtgccatgta 583

                                                                       
Query: 61  ccctgaatctatggtctaagtatacatgtgaaggggtggagctatgagctgggacggagt 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 582 ccctgaatctatggtctaagtatacatgtgaaggggtggagctatgagctgggatggagt 523

                                                                       
Query: 121 gaagccagaaggagtagtgctatattttactagtgatggttccatatgaatgtatacaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gaagccagaaggagtagtgctatattttactagtgatggttccatatgaatgtatacaga 463

                                                                       
Query: 181 tccaaaactacataaggttatggacacactcactcaactgagcatgtaaaaaataagtta 240
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tccaaaactgcataaggttatggacacactcactcaactgagcatgtaaaaaataagtta 403

                                                                       
Query: 241 ggtttcagtatggcataccaatgtgtcacgactgtctaatatcatactacagatagtcga 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ggtttcagtatggtataccaatgtgtcacgactgtctaatatcatactacagatagtcga 343

                                                                       
Query: 301 caactgggttaaagacactgcaacctatcaccactggtttggcaaccctctttgaatcag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 caactgggttaaagacactgcaacctatcaccactggtttggcaaccctctttgaatcag 283

                                                                       
Query: 361 ttatttcaaaacagaggcaacagtagaggctccaagctggaatcattaatttggtgagtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ttatttcaaaacagaggcaacagtagaggctccaagctggaatcattaatttggtgagtg 223

                                 
Query: 421 tgctttgttttggattttgtga 442
           ||||||||||||||||||||||
Sbjct: 222 tgctttgttttggattttgtga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space:   360689
Effective search space used:   360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)