XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
TACAGTTGACTCCTTCTTAACAGTCTGCTTTACGGGAACCTCTATCACCG
CGACCCGCAGTTCTGGTTCTGGAATGAGGGATCTTCCCTGCGCCAGTCCC
GAGTTTTTTCTCGTCCCGGGTTTCGGCACCAATTGTTATTAGACGCGTTC
TCACGACCGGCCAGGAAAGACGCAACAAACCAGAATCTTCTGCGGCAAAG
CTTTATTGCTTACATCTTCAGGAGCCAGAGTGCAAGAAGCAAGAGCGAGA
GAAAACGAAACCCTGTCCCTCGTAAGGAGGATTATCCTTCGCCTCGGACG
TGTCACTCCCTGATTGGCTGCAGCCCATCGGCCGAGTTGACGTCACGGGG
AAGGCAGAGTACAAGTAGTCACAAAATACCCTTGGCACATGCGCAGATTA
TTTGTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTATCGGCGAA
TGTGGGCGCGGCTCCCATCAGGGTACATTCTATTTTTGACTCTAACTCTA
TTATATCTTTTTGGCAAAAACACTTAAAGCCTTCTCTTAAAACTCTCTTT
CCAAAACTATTTTGAAGTAAATCAGGGAATCCTATAAATACCATTATTTC
TTTCGAACTATCCCCTAATCCTTTGGAAAGTTCATCCTTTTATGGTGACT
CTGGTGCGCAAATCTCGCCCATTAAGTGTGTGGTTTTCCTTTTTCCTTGA
AN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTACCTGGCATGTTTGAGGCCCTAGGTTTGAA
TCCTAGACTGCAAAAATGCTACTTAACCGAAACCACAAACAATAAGGAGA
AACTCTGGAGTCTGTTGTCTATGATGGAATTTAACTAAAATAGCAACACT
GCACTGTTTTTAAAATGTCAAAGTTTGATCCAAGTTCAAACCACCAAAAT
TCAGTTTACATTGGCCAACTCCTAACTCTTGAATTTCTGTGAATTATTTG
CTAATTTAATAGTGCTTATGAATATATTTTATTATTTCTCTGAAATATGA
TTTAGAAGTTATGGTTTCCATGGTATGCTAATGTCATTTATAGGAAGAGA
AGAAGGAAATTTTGTTTCGCTTTGTTTTGTTTTTGTTTTTTGTCGAGACA
GGGTTTCTCTGTGTAGCCCTGGCTGTCCTGNAGGAACTCACTCTGTAGAC
CAAACTGGCCTCGAACTCAAAAATCCCCCTGCCTTCTGTCTCCCAAGTGC
TTGGAAATTAAAAGGCGGGGGCCCCCCTCTGCGCCGGATTTATAAAACGG
AAATCTTTTTAAAAGGCCCCCATTGGGAAACTCTTCTCCTTTTAAAAACA
TCTTCTGCCCCGCCTCCCATTCTCTTCATCTTCNCATCTTTCATTCTCTA
CTTTCTCACCTTCTTTTN

Query= MSMg01no434_l02.g1 MSMg01no434_l02.g1 CHROMAT_FILE:
MSMg01no434_l02.g1 PHD_FILE: MSMg01no434_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:11 2005
         (428 letters)



>mm_chr12_53913500_53914327
          Length = 828

 Score =  716 bits (370), Expect = 0.0
 Identities = 414/429 (96%), Gaps = 2/429 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttacctggc-atgtttgaggccctaggtttgaatcctagactgcaaaaatgctacttaac 59
           |||||| || ||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 610 ttacct-gctatgtttgaggccctaggtttgaatcctagaccgcaaaaatgctatttaac 552

                                                                       
Query: 60  cgaaaccacaaacaataaggagaaactctggagtctgttgtctatgatggaatttaacta 119
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 551 cgaaaccacaaacaataaggagaaactctggagtccgttgtctatgatggaatttaacta 492

                                                                       
Query: 120 aaatagcaacactgcactgtttttaaaatgtcaaagtttgatccaagttcaaaccaccaa 179
           ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 491 aaatagcaacactgcactgttttgaaaatgtcaaattttgatccaagttcaaaccaccaa 432

                                                                       
Query: 180 aattcagtttacattggccaactcctaactcttgaatttctgtgaattatttgctaattt 239
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 431 aattcagtttacattggccaactcctaactcttgagtttctgtgaattatttgctaattt 372

                                                                       
Query: 240 aatagtgcttatgaatatattttattatttctctgaaatatgatttagaagttatggttt 299
           |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 371 aatagtgcttatgaatatattttagtatttttctgaaatatgatttagaagttatggttt 312

                                                                       
Query: 300 ccatggtatgctaatgtcatttataggaagagaagaaggaaattttgtttcgctttgttt 359
           ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 311 ccatggtatgctaatgtcacttataggaagagaagaaggaatttttgtttcgctttgttt 252

                                                                       
Query: 360 tgtttttgttttttgtcgagacagggtttctctgtgtagccctggctgtcctgnaggaac 419
           |||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 251 tgtttttgttttttttcgagatagggtttctctgtgtagccctggctgtcctggaggaac 192

                    
Query: 420 tcactctgt 428
           |||||||||
Sbjct: 191 tcactctgt 183


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space:   343161
Effective search space used:   343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)