Query= MSMg01no434_m18.b1 MSMg01no434_m18.b1 CHROMAT_FILE:
MSMg01no434_m18.b1 PHD_FILE: MSMg01no434_m18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:19 2005
(244 letters)
>mm_chr12_81908827_81909470
Length = 644
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Minus
Query: 1 taaggaacttaaaaccagtcttgatggtactgcaagtttgaagccactttgggcaacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 taaggaacttaaaaccagtcttgatggtactgcaagtttgaagccactttgggcaacatg 471
Query: 61 tcaaaatgtggactcaaaacaaaacaaaagcactgttctatacatgctaagccttttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tcaaaatgtggactcaaaacaaaacaaaagcactgttctatacatgctaagccttttgta 411
Query: 121 tcatcttaccttatagtattaatttagttctgtataaatttgggacttcacccttttgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tcatcttaccttatagtattaatttagttctgtataaatttgggacttcacccttttgaa 351
Query: 181 tgtgtcttagtccactatagctattaattcaaacctcataataaccatgttaaattagat 240
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgtgtcttagtccactatatctattaattcaaacctcataataaccatgttaaattagat 291
Query: 241 cctg 244
||||
Sbjct: 290 cctg 287
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no434_m18.g1 MSMg01no434_m18.g1 CHROMAT_FILE:
MSMg01no434_m18.g1 PHD_FILE: MSMg01no434_m18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:19 2005
(250 letters)
>mm_chr12_81675692_81676345
Length = 654
Score = 464 bits (240), Expect = e-135
Identities = 249/254 (98%), Gaps = 4/254 (1%)
Strand = Plus / Plus
Query: 1 cactgtgagctactgtcagtggggtgaacgctgtaatgaaaaaaatagtcatcgctggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactgtgagctactgtcagtggggtgaacgctgtaatgaaaaaaatagtcatcgctggag 260
Query: 61 tagtgtggagcgattgtaataaagaacatcgcttaggaaaaccagcggaggcgggcgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtgtggagcgattgtaataaagaacatcgcttaggaaaaccagcggaggcgggcgcct 320
Query: 121 gccttccagcggtttggagccaggaatgaatgcattcacaggagcgatagataggaagg- 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccttccagcggtttggagccaggaatgaatgcattcacaggagcgatagataggaagga 380
Query: 180 ---ccgttgggaatgacggttttaattccctttgctgagatgagagggagccggggatcc 236
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggccggtgggaatgacggttttaattccctttgctgagatgagagggagccggggatcc 440
Query: 237 aaagacaggttggg 250
||||||||||||||
Sbjct: 441 aaagacaggttggg 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 654
Length adjustment: 9
Effective length of query: 241
Effective length of database: 645
Effective search space: 155445
Effective search space used: 155445
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
