Query= MSMg01no435_j04.b1 MSMg01no435_j04.b1 CHROMAT_FILE:
MSMg01no435_j04.b1 PHD_FILE: MSMg01no435_j04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:22 2005
(253 letters)
>mm_chr12_9142800_9143452
Length = 653
Score = 427 bits (221), Expect = e-124
Identities = 242/249 (97%)
Strand = Plus / Minus
Query: 1 atgttcaaggcctcctgggtgtcacctttttttctaatagcactattcccagcactggca 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 449 atgttcaaggcctcctgggtgtcacctttttttctaacagcactattcccagcactggca 390
Query: 61 gaccctacctgcgcactagtggtcccagctctgtagaatcagatcatactagaaccagat 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaccctacctgcgcactagtggccccagctctgtagaatcagatcatactagaaccagat 330
Query: 121 cataacagaagcccatcaagagagtattctctctggggaccctgattgactgtagccaaa 180
|| || ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 329 cagaagagaagcccatcaagagagtattctctctggggaccctgactgactgtggccaaa 270
Query: 181 gaaaaacaggttatcttttgtgatgtcctcagagaacaatgtaaagatttggagcatggt 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 269 gaaaaacaggttatcttttgtgatgtcctcagagaataatgtaaagatttggagcatggt 210
Query: 241 aatagctgc 249
|||||||||
Sbjct: 209 aatagctgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no435_j04.g1 MSMg01no435_j04.g1 CHROMAT_FILE:
MSMg01no435_j04.g1 PHD_FILE: MSMg01no435_j04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:00:22 2005
(284 letters)
>mm_chr12_8982512_8983194
Length = 683
Score = 509 bits (263), Expect = e-148
Identities = 279/285 (97%), Gaps = 3/285 (1%)
Strand = Plus / Plus
Query: 1 actctgtagagcagggcggcctagaactcagagatctctctgcctttacctcctgagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctgtagagcagggcggcctagaactcagagatctctctgcctttacctcctgagtgc 260
Query: 61 tgggattaaagatgcatactaccatagcagagctaacatttcttactcagtgcagtacca 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 tgggattaaagatgcatactaccataccagagctaacatttcttactcagtgcagtacca 320
Query: 121 gaccatgtgtttatattgttgagaaatttactgagacagcagccagataattaaaactgc 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 gaccatgtgtttatattgttgagaaatttactgagatagcagccagataattaaaactgc 380
Query: 181 tggttttagagaacacttgagggatttttcactgttttgagaataaagaatatttttt-a 239
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 381 tggttttagagaacacttgagggatttttctctgttttgagaataaagaatattttttta 440
Query: 240 cagtgtcttttaaaaaaatgatttatttctgttttatgttcattg 284
|||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 cagtgtcttttaaaaa--tgatttatttctgttttatgttcattg 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 683
Length adjustment: 9
Effective length of query: 275
Effective length of database: 674
Effective search space: 185350
Effective search space used: 185350
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
