Query= MSMg01no436_p10.b1 MSMg01no436_p10.b1 CHROMAT_FILE:
MSMg01no436_p10.b1 PHD_FILE: MSMg01no436_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:10 2005
(581 letters)
>mm_chr12_30161251_30162231
Length = 981
Score = 1094 bits (566), Expect = 0.0
Identities = 575/578 (99%)
Strand = Plus / Minus
Query: 4 ggaattcatgttctgttcaccttttagtctacctatgcaaatcttgtctgtgggatctag 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ggaattcatgttctggtgaccttttagtctacctatgcaaatcttgtctgtgggatctag 722
Query: 64 gatctgaggacctgagagaatagggcagactacagtctaaggctgtcgacaatcttactt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gatctgaggacctgagagaatagggcagactacagtctaaggctgtcgacaatcttactt 662
Query: 124 cagtttcagtgtattttaaaaacacaaatgtgacaaagaaagcagtggcccaaggaaggt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cagtttcagtgtattttaaaaacacaaatgtgacaaagaaagcagtggcccaaggaaggt 602
Query: 184 tgtcagagttcagaaaaacattatcagaaaaacatgtaaataaatgccaataagcacata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgtcagagttcagaaaaacattatcagaaaaacatgtaaataaatgccaataagcacata 542
Query: 244 ccaaatgataacagagcagccctttgccagaatgttctcaggacagagcaattgaaacac 303
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 541 ccaaatgataacagagcagccctttgccagaacgttctcaggacagagcaattgaaacac 482
Query: 304 aaccgcaaggcatgtactatagattatatcttggaaagcatgaaaccaaggcagaggata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aaccgcaaggcatgtactatagattatatcttggaaagcatgaaaccaaggcagaggata 422
Query: 364 taagcaaattcagggtacagtgaccagattgggttctacggctatgttctgatatctaag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 taagcaaattcagggtacagtgaccagattgggttctacggctatgttctgatatctaag 362
Query: 424 aataagcatgtcttataaattgaatgtaaatgcttgtcacaggaggcatggaatcacatc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aataagcatgtcttataaattgaatgtaaatgcttgtcacaggaggcatggaatcacatc 302
Query: 484 caagaataatccagggaacaaaacacacctgagataaaaggccctctgcctttttttccg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caagaataatccagggaacaaaacacacctgagataaaaggccctctgcctttttttccg 242
Query: 544 gaacccttcttatagttccccacagcattgctcaccat 581
||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaacccttcttatagttccccacagcattgctcaccat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_p10.g1 MSMg01no436_p10.g1 CHROMAT_FILE:
MSMg01no436_p10.g1 PHD_FILE: MSMg01no436_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:11 2005
(403 letters)
>mm_chr12_29970185_29970988
Length = 804
Score = 750 bits (388), Expect = 0.0
Identities = 400/404 (99%), Gaps = 1/404 (0%)
Strand = Plus / Plus
Query: 1 caaca-cagctgtgtcactttgcttggcagtcatcttcatcagaaatctctaagtgggac 59
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caacaacagctgtgtcactttgcttggcagtcatcttcatcagaaatctctaagtgggac 260
Query: 60 aggaaggtgacacaggcttgcgtttatagaacttgaggggttgtgttgaggcaacccttg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaaggtgacacaggcttgcgtttatagaacttgaggggttgtgttgaggcaacccttg 320
Query: 120 aggtggcaaggtggagggaggcagtagagttatggttagttaggaatgctgtcagtggac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtggcaaggtggagggaggcagtagagttatggttagttaggaatgctgtcagtggac 380
Query: 180 tgtaaactgtacctgatggactatgagtctgaggttccacatcttaggtggggcacttgc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtaaactgtacctgatggactatgagtctgaggttccacatcttaggtggggcacttgc 440
Query: 240 agcaatgtttatgtccagatatcccaggtcagctgccaacagctcattcgatcttttccc 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agcaatgaggatgtccagatatcccaggtcagctgccaacagctcattcgatcttttccc 500
Query: 300 ctccaaaaccatacctgggacttgtttgatacaaacatggaagagcaagatacctcacca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctccaaaaccatacctgggacttgtttgatacaaacatggaagagcaagatacctcacca 560
Query: 360 agaacatatagagtaagtccaatgaaatgttcatctgaagacac 403
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaacatatagagtaagtccaatgaaatgttcatctgaagacac 604
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 804
Length adjustment: 9
Effective length of query: 394
Effective length of database: 795
Effective search space: 313230
Effective search space used: 313230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
