Query= MSMg01no439_p20.b1 MSMg01no439_p20.b1 CHROMAT_FILE:
MSMg01no439_p20.b1 PHD_FILE: MSMg01no439_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:15 2005
(370 letters)
>mm_chr12_31808853_31809622
Length = 770
Score = 687 bits (355), Expect = 0.0
Identities = 365/369 (98%), Gaps = 2/369 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttctgtcttccagatgtcccatcttctatgtccttcctaagccctgggccat 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattctttctgccttccagatgtcccatcttctatgtccttcctaagccctgggccat 261
Query: 64 cagatttattgttgacaggtgccatatccacacagacataagatattctct--acaccct 121
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 262 cagatttattgttgacaggtgccatatccacacagacataagatattctctctacaccct 321
Query: 122 tcccctgagttgccagttgtttaataaagcccttgttatagaggttgtcaggagtgtgtc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tcccctgagttgccagttgtttaataaagcccttgttatagaggttgtcaggagtgtgtc 381
Query: 182 tgcatttctgtctcagtagaaggacacatgggaaggtggatgccatgtctcaccacctct 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgcatttctgtctcagtagaaggacacatgggaaggtggatgccatgtctcaccacctct 441
Query: 242 gcttggggaggatgctcattgacaggaacttcagatctcagtctctagagaaacccaaca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gcttggggaggatgctcattgacaggaacttcagatctcagtctctagagaaacccaaca 501
Query: 302 gtatatcctttctggttctccccagttgtcattggtgctgtccgagatagtcttccacat 361
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gtaaatcctttctggttctccccagttgtcattggtgctgtccgagatagtcttccacat 561
Query: 362 tctcactgt 370
|||||||||
Sbjct: 562 tctcactgt 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_p20.g1 MSMg01no439_p20.g1 CHROMAT_FILE:
MSMg01no439_p20.g1 PHD_FILE: MSMg01no439_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:15 2005
(167 letters)
>mm_chr12_31949066_31949632
Length = 567
Score = 308 bits (159), Expect = 2e-88
Identities = 165/167 (98%)
Strand = Plus / Minus
Query: 1 ttcccacctcacggtggaagggttgacacagccaggaagttggagacttttgatgagaca 60
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 367 ttcccacttcacggtggaagggttgacacagccaggaagttggagatttttgatgagaca 308
Query: 61 cccttctccacactacaaacagaatcctgcaaccaccttaagcacgcagggaggggaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cccttctccacactacaaacagaatcctgcaaccaccttaagcacgcagggaggggaaat 248
Query: 121 gggggggtgctctaaggaagcctctcatagcgcttcaaggttaagtg 167
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gggggggtgctctaaggaagcctctcatagcgcttcaaggttaagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 567
Length adjustment: 8
Effective length of query: 159
Effective length of database: 559
Effective search space: 88881
Effective search space used: 88881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
