Query= MSMg01no440_n23.b1 MSMg01no440_n23.b1 CHROMAT_FILE:
MSMg01no440_n23.b1 PHD_FILE: MSMg01no440_n23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:28 2005
(443 letters)
>mm_chr12_83237118_83237960
Length = 843
Score = 787 bits (407), Expect = 0.0
Identities = 432/441 (97%), Gaps = 3/441 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaagagtcacacatgtgcatctggctactggtgccttggtcccttctgctagga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggaattcaagagtcacacatgtgcatctggctactggtgccttggtcccttctgctagga 381
Query: 64 tggtaagatacggatttaaccataccaggccccaaaggaaagcacaatagagtcaggtta 123
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 380 tggtaagatacggatttaaccataccaggccccagaggaaagcacaatagagtcaggtaa 321
Query: 124 aacaaaccttcctgttgagctagcatgctgtttcctgccattttctggaagtgatggaac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aacaaaccttcctgttgagctagcatgctgtttcctgccattttctggaagtgatggaac 261
Query: 184 tcattactactcccaaacaaaaactgaagacgaggaaatgcctgtaactttaattttttt 243
||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 260 tcattactattccaaaacaaaaactgaagacgaggaaatgcctgtaactttaa--ttttt 203
Query: 244 ttcaaaccttgtttttaatgatgattcttgtagcccgccactctccagaggtagt-ggga 302
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 202 ttcaaaccttgtttttaatgatgattcttgtagcccaccactctccagaggtagtgggga 143
Query: 303 aagaaaggatatgggggaagtggacctgtttagaaaagttctttggagcaattcccatct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 aagaaaggatatgggggaagtggacctgtttagaaaagttctttggagcaattcccatct 83
Query: 363 gtgttgtctggaactccacagatcaattcacaggttagcagtggcagatggagtcacttc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 gtgttgtctggaactccacagatcaattcacaggttagcagtggcagatggagtcacttc 23
Query: 423 atggatacaccagcagtccag 443
|| ||||||||||||||||||
Sbjct: 22 atagatacaccagcagtccag 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_n23.g1 MSMg01no440_n23.g1 CHROMAT_FILE:
MSMg01no440_n23.g1 PHD_FILE: MSMg01no440_n23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:28 2005
(410 letters)
>mm_chr12_83036855_83037664
Length = 810
Score = 746 bits (386), Expect = 0.0
Identities = 404/410 (98%)
Strand = Plus / Plus
Query: 1 attctgtacatggttagtaaaatgctttaagggttcagatgatggcattgtggctggata 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctgtacacggttagtaaaatgctttaagggttcagatgatggcattgtggctggata 260
Query: 61 cactgtgaacgtagcatcatttttaagcatgtgtctgtgtggctccatgtgtaggtgtgt 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactgtgaatgtagcatcatttttaagcatgtgtctgtgtggctccatgtgtaggtgtgt 320
Query: 121 gcacatcagtgcgagtgagcgttgaggccagagctgttgttggtcttctgagctttgcct 180
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 gcacatcagtgcgagtgagcgttgaggccagagctgttgttggtcttccaagctttgcct 380
Query: 181 cttccaagctgtgtgaccctggtgaccttgggcgggttgtttcctctccctgtgcatcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttccaagctgtgtgaccctggtgaccttgggcgggttgtttcctctccctgtgcatcag 440
Query: 241 ttccctcatttatcagaggaggcaacactaaagccacctcccaggcttagtgcaaggatt 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 ttccctcatttatcagaggaggcaacactaatgccacctcccaggcttagtgcaaggatt 500
Query: 301 gtgtgtattaaatgtgccattgcttggcattattgtgtttgctagataaatgaccattgt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 501 gtgtgtattaaatgtgccattgcttggcattattgtgtttgctagataaatggccattgt 560
Query: 361 taatactggttaataaaataacactaggttataattcatttaatctgttc 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taatactggttaataaaataacactaggttataattcatttaatctgttc 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
