Query= MSMg01no441_n19.b1 MSMg01no441_n19.b1 CHROMAT_FILE:
MSMg01no441_n19.b1 PHD_FILE: MSMg01no441_n19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:48 2005
(321 letters)
>mm_chr12_114427781_114428500
Length = 720
Score = 584 bits (302), Expect = e-171
Identities = 315/324 (97%), Gaps = 9/324 (2%)
Strand = Plus / Minus
Query: 1 gcagggtagaggtcagggagaccacctgcagacagacttcagggcctctgccgctgggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gcagggtagaggtcagggagaccacctgcagacagacttcagggcctctgccgctgggcc 460
Query: 61 agggcactgcgggactggtcagtgtctggggcagggccaggctgggtgacataaggccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agggcactgcgggactggtcagtgtctggggcagggccaggctgggtgacataaggccag 400
Query: 121 attgttctggctgaggctgcaggcagcaccaacttgggaacaaggctggcacctgatccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 attgttctggctgaggctgcaggcagcaccaacttgggaacaaggctggcacctgatccc 340
Query: 181 gtgggacactgacagtcatgagtcaaggcccccacaggcagagcaagtctgcacgggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gtgggacactgacagtcatgagtcaaggcccccacaggcagagcaagtctgcacgggaag 280
Query: 241 ggggtggaggt----gtttttacttttctgagcctgagttggacaggggtgggaggcctg 296
||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ggggtggaggtgcagg-----acttttctgagcctgagttggacaggggtgggaggcctg 225
Query: 297 ggaggctgtggagaggtggaatgg 320
||||||||||||||||||||||||
Sbjct: 224 ggaggctgtggagaggtggaatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 720
Length adjustment: 9
Effective length of query: 312
Effective length of database: 711
Effective search space: 221832
Effective search space used: 221832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_n19.g1 MSMg01no441_n19.g1 CHROMAT_FILE:
MSMg01no441_n19.g1 PHD_FILE: MSMg01no441_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:48 2005
(462 letters)
>mm_chr12_114233384_114234245
Length = 862
Score = 886 bits (458), Expect = 0.0
Identities = 461/462 (99%)
Strand = Plus / Plus
Query: 1 tatacgtgcagagtggcatgtacatacacatacaaataaacataataaaaatgtaagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatacgtgcagagtggcatgtacatacacatacaaataaacataataaaaatgtaagttc 260
Query: 61 tgaaaaactgaagaacagaactcaagtgagcttcagccaagatagaagtaactgagatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgaaaaactgaagaacagaactcaagtgagcttcagccaagatagaagtaactgagatgg 320
Query: 121 agacaattccaggtctttcctgcatggatagaagctatgggttcacctgtgggtgaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agacaattccaggtctttcctgcatggatagaagctatgggttcacctgtgggtgaaaga 380
Query: 181 tcctgacagagagagaaaaattatttaagcccctagacctgtgtccaaaatagacctcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctgacagagagagaaaaattatttaagcccctagacctgtgtccaaaatagacctcac 440
Query: 241 taatggtatggagtagaacttgccccattgttccaggaaccgttccttaaacccgttatg 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatggtagggagtagaacttgccccattgttccaggaaccgttccttaaacccgttatg 500
Query: 301 caaacttgccagcttgccaaatgctatagcccaatgccaagtgtttgcggtttctacctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaacttgccagcttgccaaatgctatagcccaatgccaagtgtttgcggtttctacctt 560
Query: 361 tataaccccttaccccttgagctcgtggtcgactcctctacccctgcatgggatacgagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tataaccccttaccccttgagctcgtggtcgactcctctacccctgcatgggatacgagt 620
Query: 421 cgtccctagtgcactggtctttcccgaataaacctcttgcag 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgtccctagtgcactggtctttcccgaataaacctcttgcag 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
