Query= MSMg01no444_g11.b1 MSMg01no444_g11.b1 CHROMAT_FILE:
MSMg01no444_g11.b1 PHD_FILE: MSMg01no444_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:18 2005
(397 letters)
>mm_chr12_108834522_108835318
Length = 797
Score = 574 bits (297), Expect = e-168
Identities = 324/335 (96%), Gaps = 6/335 (1%)
Strand = Plus / Minus
Query: 4 gaattctcaggat--gtttac-gacattcatacttattcaatggaaacaatgaaggcttt 60
||||||||||||| | || ||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gaattctcaggatggg---acagacattcatacttattcaatggaaacaatgaaggcttt 276
Query: 61 tctctccttcaagcagagagaggaggaggtgaggagatgctggctgaagggtgtgtttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tctctccttcaagcagagagaggaggaggtgaggagatgctggctgaagggtgtgtttta 216
Query: 121 gatggcattagctgtcaatttgacacagcttagagtcttctgagaatggagtctcaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gatggcattagctgtcaatttgacacagcttagagtcttctgagaatggagtctcaagtg 156
Query: 181 ggggattagccacatcagattgtcttgtgggcacatttatggagggttgtcttgattgtt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ggggattagccacatcagattgtcttgtgggcacatttatggagggttgtcttgattgta 96
Query: 241 aattaatgtgggagggcctagtccactgtgggcagtttttttccttcagcagtggtctta 300
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 95 aattaatgtgggagggcctagtccactgtgggcagggtcattccttcagcagtggtctta 36
Query: 301 gactgtataagaaagctagctaagcatgagtctgt 335
|||||||||||||||||||||||||||||||||||
Sbjct: 35 gactgtataagaaagctagctaagcatgagtctgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no444_g11.g1 MSMg01no444_g11.g1 CHROMAT_FILE:
MSMg01no444_g11.g1 PHD_FILE: MSMg01no444_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:18 2005
(237 letters)
>mm_chr12_108660017_108660653
Length = 637
Score = 398 bits (206), Expect = e-115
Identities = 229/237 (96%)
Strand = Plus / Plus
Query: 1 tctgcggncaagtgtaaagagcaagacacagatgatgaacctcaggccccaaccaaaaga 60
||||||| |||||| ||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 201 tctgcggtcaagtgcaaagagcaaaacacagatgatgaacctcaggtcccaaccaaaaga 260
Query: 61 ggaacaaggagtgctgaagagcttgctccaatcccaagatccagcaaggcaggtggattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaacaaggagtgctgaagagcttgctccaatcccaagatccagcaaggcaggtggattc 320
Query: 121 acagaggtctttacaggaagtgatggagggtacctgaatcccgtgcacaaactgtttaga 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 acagaggtctttacaggaagtgatggtgggtacctgaatcccgtgcacaaactgtttaga 380
Query: 181 aatgttctgttcccaagccaagagagcccttctttctcaaacagggatgcagcatcc 237
||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 aatgttctgtttctaagccaagagagcccttctttctcaaacagggctgcagcatcc 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
