Query= MSMg01no445_f08.b1 MSMg01no445_f08.b1 CHROMAT_FILE:
MSMg01no445_f08.b1 PHD_FILE: MSMg01no445_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:29 2005
(570 letters)
>mm_chr12_9868870_9869839
Length = 970
Score = 1064 bits (550), Expect = 0.0
Identities = 562/566 (99%)
Strand = Plus / Plus
Query: 5 gaattccagttatagctgacaatgtcagggtgagaaataccatttcactgacctggaggc 64
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagttaaagatgacaatgtcagggtgagaaataccatttcactgacctggaggc 264
Query: 65 ctctttgtatgggtccggttatgctcaagacttaagatacactgactttagtggaaacag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctctttgtatgggtccggttatgctcaagacttaagatacactgactttagtggaaacag 324
Query: 125 agacttatggaaaattacatcacttgctagtgtaggattgaagttgcaatgcctggcttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agacttatggaaaattacatcacttgctagtgtaggattgaagttgcaatgcctggcttg 384
Query: 185 aattttggccttactccacccttttcctcctccctggctgctcctgtggccatgtggccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aattttggccttactccacccttttcctcctccctggctgctcctgtggccatgtggccc 444
Query: 245 aatcccaaagccaatacacagagtggcattctgtgcacagggtggtagcttctggcagtt 304
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 445 aatcccaaagccaatacacagagtggccttctgtgcacaggatggtagcttctggcagtt 504
Query: 305 ggctgatgtatccattatgccacaaggagggggaactcaccaatttcagtagcaatctaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggctgatgtatccattatgccacaaggagggggaactcaccaatttcagtagcaatctaa 564
Query: 365 tagatcatccaaaaagtctaaggtatatttatataattgccatgtttcccctgtcatgaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tagatcatccaaaaagtctaaggtatatttatataattgccatgtttcccctgtcatgaa 624
Query: 425 cataactgaaataaaatggtgtgactcattgagaaacttctctgaaaggaccaaataatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cataactgaaataaaatggtgtgactcattgagaaacttctctgaaaggaccaaataatc 684
Query: 485 cccaggttgtgattctctacatcagaacagtaatatattattttccattccaaaaactca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cccaggttgtgattctctacatcagaacagtaatatattattttccattccaaaaactca 744
Query: 545 ccaatctttatgtaccagctttgtga 570
||||||||||||||||||||||||||
Sbjct: 745 ccaatctttatgtaccagctttgtga 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_f08.g1 MSMg01no445_f08.g1 CHROMAT_FILE:
MSMg01no445_f08.g1 PHD_FILE: MSMg01no445_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:30 2005
(493 letters)
>mm_chr12_10036449_10037340
Length = 892
Score = 946 bits (489), Expect = 0.0
Identities = 492/493 (99%), Gaps = 1/493 (0%)
Strand = Plus / Minus
Query: 1 tcattttgattttcccaatgataaagtgttcaaactcatagagtcttagtaaaagcaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 692 tcattttgattttcccaatgataaagtgttcaaactcatagagtcttagtaaaagc-aaa 634
Query: 61 aaaaatatctattcgctcttctaaaggtgcttccagcagacctattagttcaggaaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aaaaatatctattcgctcttctaaaggtgcttccagcagacctattagttcaggaaagca 574
Query: 121 aacttacttctccctgtaagtacttactgactttacagttcttgcccctgtctatcagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aacttacttctccctgtaagtacttactgactttacagttcttgcccctgtctatcagtg 514
Query: 181 aacaggatataaggtaaactgaaatttgctattacatactaatgtgcataaattaaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 aacaggatataaggtaaactgaaatttgctattacatactaatgtgcataaattaaattg 454
Query: 241 ctttcagctgcaagttaaagaaagcttcgcctctaatcatcttaaataataaggaagtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ctttcagctgcaagttaaagaaagcttcgcctctaatcatcttaaataataaggaagtat 394
Query: 301 actatttctcaagggagagaatgcagaataatatagtgggtaccattatcccattcaaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 actatttctcaagggagagaatgcagaataatatagtgggtaccattatcccattcaaca 334
Query: 361 tatagcctctcaccacaggatccctagagatccctaatgctccaagtcattggcaattca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tatagcctctcaccacaggatccctagagatccctaatgctccaagtcattggcaattca 274
Query: 421 ttaacttctgtagtagcagtatttactataggcttatgctaacttaaaaaaattacatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ttaacttctgtagtagcagtatttactataggcttatgctaacttaaaaaaattacatgt 214
Query: 481 atcatcctctttg 493
|||||||||||||
Sbjct: 213 atcatcctctttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 892
Length adjustment: 10
Effective length of query: 483
Effective length of database: 882
Effective search space: 426006
Effective search space used: 426006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
