Query= MSMg01no448_m14.b1 MSMg01no448_m14.b1 CHROMAT_FILE:
MSMg01no448_m14.b1 PHD_FILE: MSMg01no448_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:10 2005
(376 letters)
>mm_chr12_76726770_76727545
Length = 776
Score = 665 bits (344), Expect = 0.0
Identities = 365/372 (98%)
Strand = Plus / Minus
Query: 5 aattctggtcatcttatctggtgataattgcctttactcactgagccatctccctccctc 64
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 aattctggtcatcagatttggtgataattgcctttactcactgagccatctccctccctc 713
Query: 65 cctccctttctttttttccacagacaagatctccaaatgtagctctggcaggcttagaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 cctccctttctttttttccacagacaagatctccaaatgtagctctggcaggcttagaac 653
Query: 125 tcactatgtaaatgaggctcctgaaacttgcctctccctcctgattgtggtgattacagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tcactatgtaaatgaggctcctgaaacttgcctctccctcctgattgtggtgattacagg 593
Query: 185 tgtgtttaaccacatcaagtttatttctttctcactttcttttatcttgtctggaggtgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tgtgtttaaccacatcaagtttatttctttctcactttcttttatcttgtctggaggtgt 533
Query: 245 ggagtttattgaatctgtaaattagtgtagtctgatgatgcgagaatggctttgcctatg 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 532 ggagtttattgaatctgtaaattagtgtagtctgaggatgcgagaatggctttgcctgtg 473
Query: 305 gactggtaattgaatgctatagagacagacattgcattgatggcagtgatgaattctgac 364
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gactggtaattgaatgctaaagagacagacattgcattgatggcagtgatgaattctgag 413
Query: 365 gaagattttgcc 376
||||||||||||
Sbjct: 412 gaagattttgcc 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_m14.g1 MSMg01no448_m14.g1 CHROMAT_FILE:
MSMg01no448_m14.g1 PHD_FILE: MSMg01no448_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:11 2005
(421 letters)
>mm_chr12_76555500_76556321
Length = 822
Score = 770 bits (398), Expect = 0.0
Identities = 416/422 (98%), Gaps = 1/422 (0%)
Strand = Plus / Plus
Query: 1 tcatctactaacataattcatttcattacctctagcttactgcaatgaactggtgaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatctactaacataattcatttcattacctctagcttactgcaatgaactggtgaaaag 260
Query: 61 agaacactgtgaattcacaaattcaaacaactcctaagcacaggagttttgtagcctcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaacactgtgaattcacaaattcaaacaactcctaagcacaggagttttgtagcctcag 320
Query: 121 actcaaggaactggccctcgcatatcttattcaa-aacagtatgttttttacttatagaa 179
||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||
Sbjct: 321 actcaaggaactggccctcgcgtatcttattcaacaacagtatgttttttacttagagaa 380
Query: 180 attcataaggataatgtcaactttgcatggaattccaatgctaaacactattttagtaat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attcataaggataatgtcaactttgcatggaattccaatgctaaacactattttagtaat 440
Query: 240 catctatactttgcaaagttatattaaattatctaacaataggaagaagaaactggtgag 299
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caccaatactttgcaaagttatattaaattatctaacaataggaagaagaaactggtgag 500
Query: 300 atggctcagtggttaagagcactggctgttcctccagaggacctgggttcaattcccagc 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 atggctcagtggttaagagcactggctgttcctccagaggacctgggttcaattcctagc 560
Query: 360 acccacatggcagctcacaactgtaacttcagttccaggcaggcacgtggcacacaaaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acccacatggcagctcacaactgtaacttcagttccaggcaggcacgtggcacacaaaca 620
Query: 420 tg 421
||
Sbjct: 621 tg 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 822
Length adjustment: 9
Effective length of query: 412
Effective length of database: 813
Effective search space: 334956
Effective search space used: 334956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
