Query= MSMg01no448_p23.b1 MSMg01no448_p23.b1 CHROMAT_FILE:
MSMg01no448_p23.b1 PHD_FILE: MSMg01no448_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:28 2005
(536 letters)
>mm_chr12_59721561_59722497
Length = 937
Score = 1007 bits (521), Expect = 0.0
Identities = 530/533 (99%), Gaps = 1/533 (0%)
Strand = Plus / Plus
Query: 5 gaattctttttattctctctttttta-aagaaaatattctgtggttagctaatcattgta 63
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttttattctttcttttttacaagaaaatattctgtggttagctaatcattgta 264
Query: 64 aaacaatctaagaattattttacatgtcctaagcaatgactagccaatgttgacattcca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaacaatctaagaattattttacatgtcctaagcaatgactagccaatgttgacattcca 324
Query: 124 tgaacagttccgaaaaaccttcagtcatccaaggattcaatgacatggaacttgatggat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaacagttccgaaaaaccttcagtcatccaaggattcaatgacatggaacttgatggat 384
Query: 184 gctatttttggtgcattagtagacatcctagagccatgcacagctagagaattattccta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctatttttggtgcattagtagacatcctagagccatgcacagctagagaattattccta 444
Query: 244 cagaattaattgtgcatgaaattttcatagcccagagaaataaaatttacagaaatcact 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagaattaattgtgcatgaaattttcatagcccagagaaataaaatttacagaaatcact 504
Query: 304 gatgtcagtgtgagccataaacatattatccaactctatgtcttcatagtccctccctca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gatgtcagtgtgagccataaacatattatccaactctatgtcttcatagtccctccctca 564
Query: 364 cctgattaaaattccatcactgggttctaggccaatctttattaaaaattctgatatttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cctgattaaaattccatcactgggttctaggccaatctttattaaaaattctgatatttt 624
Query: 424 gttcattatatatatatactttaggatgctctacagtagtatgtttccacataacttttc 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gttcattatatatatatactttaggatgctctacagtagtatgtttccacataacttttt 684
Query: 484 ctaggaggtcattagtgttatatctttccatatttcctcctttattttccctt 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctaggaggtcattagtgttatatctttccatatttcctcctttattttccctt 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 937
Length adjustment: 10
Effective length of query: 526
Effective length of database: 927
Effective search space: 487602
Effective search space used: 487602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_p23.g1 MSMg01no448_p23.g1 CHROMAT_FILE:
MSMg01no448_p23.g1 PHD_FILE: MSMg01no448_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:28 2005
(387 letters)
>mm_chr12_59866931_59867719
Length = 789
Score = 717 bits (371), Expect = 0.0
Identities = 384/389 (98%), Gaps = 2/389 (0%)
Strand = Plus / Minus
Query: 1 tctggaactccagatatctaatgaggaactgagagtatggggaaacactatggagagaat 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tctggaactccagctatctaatgaggaactgagagtatggggaaacactatggagagaat 530
Query: 61 ctatactgttgtgttcctccctctaccccctgagcctggcacaaacagttttgaatcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ctatactgttgtgttcctccctctaccccctgagcctggcacaaacagttttgaatcagc 470
Query: 121 ccagtctcaaatggagtttgaaaagcattgctcagtatccaacctatgcagacacatata 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ccagtctcaaatggcgtttgaaaagcattgctcagtatccaacctatgcagacacatata 410
Query: 181 gacaggaacaactatttgtgagaagtccaggaggccaaggaatgccaaatgtaaggggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gacaggaacaactatttgtgagaagtccaggaggccaaggaatgccaaatgtaaggggga 350
Query: 241 gtaaaagactccagtcatgtgttcctccagagattaaggcatccattaagggactgtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gtaaaagactccagtcatgtgttcctccagagattaaggcatccattaagggactgtttt 290
Query: 301 tggaggacatgagtaagagatgctcttagggac--tatagatggagttcgtttgtggggc 358
||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 289 tggaggacatgagtaagagatgctcttagggacattatagatggagtttgtttgtggggc 230
Query: 359 acatacatgctcagcatgtgtgaggttct 387
|||||||||||||||||||||||||||||
Sbjct: 229 acatacatgctcagcatgtgtgaggttct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 789
Length adjustment: 9
Effective length of query: 378
Effective length of database: 780
Effective search space: 294840
Effective search space used: 294840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
