Query= MSMg01no449_c21.b1 MSMg01no449_c21.b1 CHROMAT_FILE:
MSMg01no449_c21.b1 PHD_FILE: MSMg01no449_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:43 2005
(631 letters)
>mm_chr12_85022028_85023058
Length = 1031
Score = 1205 bits (623), Expect = 0.0
Identities = 629/631 (99%)
Strand = Plus / Minus
Query: 1 gagccattttaatatttacaaggaacaaatcagcagaacaagatgctatcagataggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 gagccattttaatatttacaaggaacaaatcagcagaacaagatgctatcagataggctg 772
Query: 61 tgtacagtagctgcagcttataaaacacaccagtagtctgtgcctggtgagcataaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 tgtacagtagctgcagcttataaaacacaccagtagtctgtgcctggtgagcataaagag 712
Query: 121 gaccaaggacacagatggctttacacccgagtgagtacacagagcatcaacaaattagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gaccaaggacacagatggctttacacccgagtgagtacacagagcatcaacaaattagag 652
Query: 181 gacaaaagaattcacattttctacattaaaaaattacagatctcacaaatgtctttgaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gacaaaagaattcacattttctacattaaaaaattacagatctcacaaatgtctttgaag 592
Query: 241 acacagaaaattcaaagtcctttgaagggtgtgaaagaagaaatctgaaatgtaactctg 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 acaccgaaaattcaaagtcctttgaagggtgtgaaagaagaaatctgaaatgtaactctg 532
Query: 301 aatgtaaaaagttttacttcacaaggccaattttcttggcttctgtttcatatatcaata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 aatgtaaaaagttttacttcacaaggccaattttcttggcttctgtttcatatatcaata 472
Query: 361 atctccacattttgactataaaaacttctgcttcttcatctagtacctagaaaataaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atctccacattttgactataaaaacttctgcttcttcatctagtacctagaaaataaaag 412
Query: 421 acaggaacacatgtaaagatacttattggtatattaaaacaacagtaacataccaaaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 acaggaacacatgtaaagatacttattggtatattaaaacaacagtaacataccaaaaca 352
Query: 481 tccaccaaatacaatcaacataatgacttaaaagaacaactgtccagtatgaaaatattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tccaccaaatacaatcaacataatgacttaaaagaacaactgtccagtatgaaaatattt 292
Query: 541 taaacacaacatttacggtacaaagaaagatgatgattcagccaaactcaatgacttact 600
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 291 taaacacaacatttacggtacaaagaaagataatgattcagccaaactcaatgacttact 232
Query: 601 aaatactaataatttcaatatacttctgttt 631
|||||||||||||||||||||||||||||||
Sbjct: 231 aaatactaataatttcaatatacttctgttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_c21.g1 MSMg01no449_c21.g1 CHROMAT_FILE:
MSMg01no449_c21.g1 PHD_FILE: MSMg01no449_c21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:43 2005
(499 letters)
>mm_chr12_84870715_84871613
Length = 899
Score = 919 bits (475), Expect = 0.0
Identities = 493/499 (98%), Gaps = 1/499 (0%)
Strand = Plus / Plus
Query: 1 tttttcctaaagaacttccaggtttttactttgaccctgaaaagaaccgatacttccgtt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttttt-ctaaagaacttccaggtttttactttgaccctgaaaagaaccgatacttccgtt 260
Query: 61 tgctcccgggtcacaacaactgcaaccccctcacaaaggagggcatccagcaaaaggaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctcccgggtcacaacaactgcaaccccctcacaaaggagggcatccagcaaaaggaga 320
Query: 121 tggagagcaggaggctgcagctgctgcagcaagaggacatgcagaaaaaggtgggctacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggagagcaggaggctgcagctgctgcagcaagaggacatgcagaaaaaggtgggctacc 380
Query: 181 cttgtctacccagtgcctgctactcccaacagcacccatctgccgctgagagcagctgcc 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttggctacccagtgcctgctactcccaacagcacccatctgccgctgagagcagctgcc 440
Query: 241 agtcaggtgccctgtgtttctcacgtatgacagactgtgctatcagagtttccctgacat 300
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtcaggtgccctgggacactcacgtatgacagactgtgctatcagagtttccctgacat 500
Query: 301 ggaaatgatggattaaagaccaggcaagaggccccatttcccacttccctttctgtctgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaaatgatggattaaagaccaggcaagaggccccatttcccacttccctttctgtctgc 560
Query: 361 tgacatagaccctggcatctggtctcactctgtatacaccagcctattgcctatgagcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgacatagaccctggcatctggtctcactctgtatacaccagcctattgcctatgagcaa 620
Query: 421 gcaagaggggtggcacagactggcaagcccccagactgcctcgtactgggtttctcttac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcaagaggggtggcacagactggcaagcccccagactgcctcgtactgggtttctcttac 680
Query: 481 tgccaatgaggggagactt 499
|||||||||||||||||||
Sbjct: 681 tgccaatgaggggagactt 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
