GGCCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCTTGGATTTCGAGTACAGACAGCTGTGAGCTGTCATGAGGGAGC
TAGTAATTGAACTCAGGTCTTTTAAAACAGTAGTCAGTTCTCTTACCCTC
TGAGCCATCTCTCCAGTCCCAACTTCTCAAACGTTGCTTTAAGAGCTCTC
TTCTATCTTGGCTTCTTTGAATCCATCCACAATTTACTATATTATGCATA
TTTCCCAACACTGATCTGCTAATCCCTCTCTAGCAGAGGATTATCTATCT
CTCTTTCCCTCAAGGCAACATAAGTGACCAGAATTTACAAAGACATACCA
TACTTGATTAAACCAATAACTATGAACATGACAATAACAGACATTTCCAA
CAAATCTAATAAATACACACATACATATTGTTTGATTTGTGTTTTTGAGA
CAAGGACTCATGTAGCCCAAGTTGGCCTTGAGTCTGCTAAGCAGCTGAAG
ATGACATTGAATTCCTGAACCTTCTGCCTTCCAGCATAAGCTACTGGCAT
GGGCTACTCTTCCCTGCCTTTGTTTCTAAATAGAACTAAGGATTTATATA
GCTTGGGCTGCTTTGGTCTTCTTATTTTGCTGAACATGACCTTGAACTTC
TGATTTGGCTGCCTCTGCATCCCAAGTTCTGAGAGTCAAACTTAGCTATG
TATAGTGCATACAGTATACTTTACCAAATTTATGAATACA

NCCCCATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTCTCACTCCTAGGTGGTGAACA
GGGTTTGTAGGAGCTGTTGGCAACCATCCCAGGTGGGCTGGTGTGAGTAC
ATCAGAGACTATCAACCCTTTAAGCCCTGTAGGATTTTCTGAGAAAGGGG
GGGGGGTTACTTTCCAGTTATAGAGATCAGAGGAAGAAAAAGGCCAGTAT
TGCTGTAGATCATTCTGGCTGGCAGGGGGAGCTCCAACAGCCCTAAGGGA
AAGTGCCACCTTAGAATCGGCTGGCCCCACTCTGGGGGCTCCCCGCTGGC
TTCTTGTTCCTGCTGAGGGACCTCCCTCCCCAATCTCTAGAACTGAAGGT
GGAGCCATGGGAGCTGAGGGTTGGGGTACAGGTTGGAGAACCAGGGGATA
AGGTGGTGGTAAAGAGTCGGGCCATTCAGGGGGCCACTCTATTTCTGGGT
AGATTTTAGAAATGGCTGCTGGCTGCAGCTGAGTAGATTTTTCACTGGCT
TCTCCGGGTAGTAGTTTCGATTTCCCCTTCTCAGCATTCTCTCGGACCAT
CAAAACCTTGGTACCTGGACGTAGGGGTGGGAGAAATGGACGAACCCAAG
CAGGCAGAAATCGTGCTAAATCTTCCCACACTGTGATGTACAGTTGCTGG
TCCGGGTGCAATCATGGTCCTTCCTGAAAAACATGG

Query= MSMg01no451_k18.b1 MSMg01no451_k18.b1 CHROMAT_FILE:
MSMg01no451_k18.b1 PHD_FILE: MSMg01no451_k18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:00 2005
         (600 letters)



>mm_chr12_25099857_25100856
          Length = 1000

 Score = 1083 bits (560), Expect = 0.0
 Identities = 590/600 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcttaccctctgagccatctctccagtcccaacttctcaaacgttgctttaagagctctc 60
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttaacctctgagccatctctccagtcccaacttctcaaacgttgctttaagagctctc 260

                                                                       
Query: 61  ttctatcttggcttctttgaatccatccacaatttactatattatgcatatttcccaaca 120
            |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctatcttggcttctttgaatccagccacaatttactatattatgcatatttcccaaca 320

                                                                       
Query: 121 ctgatctgctaatccctctctagcagaggattatctatctctctttccctcaaggcaaca 180
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 ctgatctgctaatccctctctagcagatgattatctatctctctttccctcaaggcaaca 380

                                                                       
Query: 181 taagtgaccagaatttacaaagacataccatacttgattaaaccaataactatgaacatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 taagtgaccagaatttacaaagacataccatacttgattaaaccaataactatcaacatg 440

                                                                       
Query: 241 acaataacagacatttccaacaaatctaataaatacacacatacatattgtttgatttgt 300
           ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 441 acaataacagacatttccaacaaatctaatatagacacacatacatattgtttgatttgt 500

                                                                       
Query: 301 gtttttgagacaaggactcatgtagcccaagttggccttgagtctgctaagcagctgaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtttttgagacaaggactcatgtagcccaagttggccttgagtctgctaagcagctgaag 560

                                                                       
Query: 361 atgacattgaattcctgaaccttctgccttccagcataagctactggcatgggctactct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgacattgaattcctgaaccttctgccttccagcataagctactggcatgggctactct 620

                                                                       
Query: 421 tccctgcctttgtttctaaatagaactaaggatttatatagcttgggctgctttggtctt 480
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 621 tccctgcctttgtttctaaatagaactaaggatttatatagcgtgggctgctttggtctt 680

                                                                       
Query: 481 cttattttgctgaacatgaccttgaacttctgatttggctgcctctgcatcccaagttct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttattttgctgaacatgaccttgaacttctgatttggctgcctctgcatcccaagttct 740

                                                                       
Query: 541 gagagtcaaacttagctatgtatagtgcatacagtatactttaccaaatttatgaataca 600
           |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 741 gagagtcaaactaagctatgtatagtgcatacagtatacttcaccaaatttatgaataca 800


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space:   584100
Effective search space used:   584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)