CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTTTTAGAACATATACAAACATCCAGATCTTCCAATTCATTTTCTGTG
GTTAGGTCTAAGGCTGTTAAGAGGATGGAGAGGAAAACCTTAAGGCTGCC
TGTGGCTTTGGGTGCTGGGGTGGTGGTGTTGGTGGTATGGACATGGGGTG
CTTGCTAATACAGAACAGTTCCTGTTACATCCAGAGCCAGCTTCTCCCTC
CCCTTCTCGCCCTCGTCCCCATCTCCTTCTCCCACTCTTCTCCTCTCCTC
CTCTTCCCTCTTTCCTGCTCTCCATCTCCTCTTTTCCCCTTCTCTCTCCC
ATTCTTCCCCCATCCCTTTCATTTTCTGTTTCCTTTGCCTCTTTTCGCTC
TCCCCATTCCTTTTCTTTTCTCTTAGTAGTAGCTGCCAGCTAACCTTTCT
GCCAACCTAACTCAAAGTAGGTTACTTTAGGTGAACCAGAAAATCAATTT
CTCTGCAGTTTTTCATCCTTATAATTAAACCCACCTTGAAGGCTAAAGAA
AAGCTCTTTATGTTTGGGTCCTTAAGGAAGCTGAACTGTTGCTCATCTCT
TCTTATGCCACACCATGAGCTCTTAAAAGCCATGGCCACAAATTGCTAGA
GAGGGAAACCTCTCATTCCGTCTTTCTCCATTGCTCTTGTTTTCCAAGTT
TTTAGAATTTAAAGGTTGAACCTCAATTCACATGCCACAAAACTCAACAG
CTTAAATGCATAATAGGGTGTTTTCAG

ATTGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCATGA
ATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGATG
ATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGGA
TTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGT
CAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATT
TTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTT
CTCTATCTTTGTTGGGTCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGG
CTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGTGAAAT
AGTTTGTGCAGAATTGGAATTAGATCTTCTTTGAAGGTCTGGTAGAACTC
TGCACTAAACCCATCTGGTCCTGGGCTTCTTTTGGTTGGGAGACTATTAA
TAACTGCTTCTATTTCTTTAGGTGATATGGGACTGTTTAGAAGGTCAACT
TGATCCTGATTCAACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCAT
TTCGTCCAGGTTTTCCAGTTTTGTTGAGTATAGCCTTTTTTTTTTTTTTT
TAAATTCACAAAATTTTTATTGAATAAGAAGATGGCATGGCTTTCTCACA
ACGATTCTTTTTTTTTCATTTTTTA

Query= MSMg01no453_k20.b1 MSMg01no453_k20.b1 CHROMAT_FILE:
MSMg01no453_k20.b1 PHD_FILE: MSMg01no453_k20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:37 2005
         (664 letters)



>mm_chr12_34368654_34369717
          Length = 1064

 Score = 1062 bits (549), Expect = 0.0
 Identities = 555/557 (99%)
 Strand = Plus / Minus

                                                                        
Query: 108  ctgtggctttgggtgctggggtggtggtgttggtggtatggacatggggtgcttgctaat 167
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1064 ctgtggctttgggtgttggggtggtggtgttggtggtatggacatggggtgcttgctaat 1005

                                                                        
Query: 168  acagaacagttcctgttacatccagagccagcttctccctccccttctcgccctcgtccc 227
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1004 acagaacagttcctgttacatccagagccagcttctccctccccttctcaccctcgtccc 945

                                                                        
Query: 228  catctccttctcccactcttctcctctcctcctcttccctctttcctgctctccatctcc 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944  catctccttctcccactcttctcctctcctcctcttccctctttcctgctctccatctcc 885

                                                                        
Query: 288  tcttttccccttctctctcccattcttcccccatccctttcattttctgtttcctttgcc 347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884  tcttttccccttctctctcccattcttcccccatccctttcattttctgtttcctttgcc 825

                                                                        
Query: 348  tcttttcgctctccccattccttttcttttctcttagtagtagctgccagctaacctttc 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824  tcttttcgctctccccattccttttcttttctcttagtagtagctgccagctaacctttc 765

                                                                        
Query: 408  tgccaacctaactcaaagtaggttactttaggtgaaccagaaaatcaatttctctgcagt 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764  tgccaacctaactcaaagtaggttactttaggtgaaccagaaaatcaatttctctgcagt 705

                                                                        
Query: 468  ttttcatccttataattaaacccaccttgaaggctaaagaaaagctctttatgtttgggt 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704  ttttcatccttataattaaacccaccttgaaggctaaagaaaagctctttatgtttgggt 645

                                                                        
Query: 528  ccttaaggaagctgaactgttgctcatctcttcttatgccacaccatgagctcttaaaag 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644  ccttaaggaagctgaactgttgctcatctcttcttatgccacaccatgagctcttaaaag 585

                                                                        
Query: 588  ccatggccacaaattgctagagagggaaacctctcattccgtctttctccattgctcttg 647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584  ccatggccacaaattgctagagagggaaacctctcattccgtctttctccattgctcttg 525

                             
Query: 648  ttttccaagtttttaga 664
            |||||||||||||||||
Sbjct: 524  ttttccaagtttttaga 508


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)