Query= MSMg01no453_p19.b1 MSMg01no453_p19.b1 CHROMAT_FILE:
MSMg01no453_p19.b1 PHD_FILE: MSMg01no453_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:02 2005
(428 letters)
>mm_chr12_109780072_109780899
Length = 828
Score = 542 bits (280), Expect = e-158
Identities = 301/308 (97%)
Strand = Plus / Minus
Query: 5 gaattcagttcaggatcccagcccatgaaacggaaccagccatagttaaaatgaatctcc 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 680 gaattcagttcaggatcccagcccatgaaacggagccagccatagttaaaatgaatctcc 621
Query: 65 ttacctcagagaacctcgtctagataatccctgatagagatggctagagatttgtttcct 124
||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 620 ttacctcagtgaatctcgtctagataatccctgatagagatggctagagatctgtttcct 561
Query: 125 tggtgactcttaaccctatcgagttgataatcaacattaaccatcacaataattaaatat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tggtgactcttaaccctatcgagttgataatcaacattaaccatcacaataattaaatat 501
Query: 185 gtcctacaccagagcccttccctggcctgtacgtgtggagtgctgatccaacaatcagtg 244
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtcctacaccagagcccttccccagcctgtacgtgtggagtgctgatccaacaatcagtg 441
Query: 245 ctgagaaagagaatgtccagagttgtagctggagaaacagccagcttttagtcacacaag 304
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctgagagagagaatgtccagagttgtagctggagaaacagccagcttttagtcacacaag 381
Query: 305 tgtgcagg 312
||||||||
Sbjct: 380 tgtgcagg 373
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_p19.g1 MSMg01no453_p19.g1 CHROMAT_FILE:
MSMg01no453_p19.g1 PHD_FILE: MSMg01no453_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:25:02 2005
(626 letters)
>mm_chr12_109611109_109612133
Length = 1025
Score = 1141 bits (590), Expect = 0.0
Identities = 617/626 (98%), Gaps = 1/626 (0%)
Strand = Plus / Plus
Query: 1 atctccagacattcaggcttctctgggatgcctgcctccagcaacagatccaggaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 atctccagacattcaggcttctctgggatgcctgcctccagcaacagatccaggaggctc 260
Query: 61 agaggaatctccctgttgtccctaactggtctcagggcctgtaaaaacagtctcaacatt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtggaatctccctgttgtccctaactggtctcagggcctgtaaaaacagtctcaacatt 320
Query: 121 catgaggcttgtgagcccttgggcaaatccactcaaaggggccatcgaagggactctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgaggcttgtgagcccttgggcaaatccactcaaaggggccatcgaagggactctgtt 380
Query: 181 cttcttaacgcagtaagagtaaaagaatccaaaacttgtagcaccattaaaatgatgcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcttaacgcagtaagagtaaaagaatccaaaacttgtagcaccattaaaatgatgcca 440
Query: 241 gtctttgttagcagtgtgagggggtttatagttcaggcaataaataagctacagggcaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtctttgttagcagtgtgagggggtttatagttcaggcaataaataagctacagggcaga 500
Query: 301 aaatggaatgacgatacccagacaccttccaagtcctgggtgttttggacgtgccattta 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 aaatggaatgacgatacccagacaccttcctagtcctgggtgttttggacgtgccattta 560
Query: 361 ctgcctagaggcaaatgacgtgactccactgttcaggcaagggagatgaagtccagcggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 ctgcctagaggcaaatgacgtgactccactgttcaggcaagggagatgaagtccagcagg 620
Query: 421 cagatgacatgcccaaggtcatcgactgctctagggtctagcagaggctggacccagcac 480
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||
Sbjct: 621 cagatgacatgcccaaggtcatcgtctgctgtagggtctagcagaggctggacccagaac 680
Query: 481 ccctattctctgtgctgggtctgtctttgtacccaggttaggtcctttattccaggagtg 540
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 ccctattctctgtgctgggtctgtctttg-acccaggttaggtcctttattccaggagtg 739
Query: 541 tcatcttgccttcagccacaccccttcttttcagagattgctaggtagctcaacactgcc 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tcatcttgccttcagccacatcccttcttttcagagattgctaggtagctcaacactgcc 799
Query: 601 tccaatcatctggagcctgtaaaaaa 626
||||||||||||||||||||||||||
Sbjct: 800 tccaatcatctggagcctgtaaaaaa 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1025
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1015
Effective search space: 625240
Effective search space used: 625240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
