Query= MSMg01no455_b14.b1 MSMg01no455_b14.b1 CHROMAT_FILE:
MSMg01no455_b14.b1 PHD_FILE: MSMg01no455_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:31 2005
(312 letters)
>mm_chr12_71962081_71962792
Length = 712
Score = 588 bits (304), Expect = e-172
Identities = 310/312 (99%)
Strand = Plus / Plus
Query: 1 aagtaggtcagtagaaatgtcttgctttaattggttcaattaaaaatggaaaagcatagt 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 aagtaggtcagtagaaatgtcttgctttaattggctcaattaaaaatggaaaagcatagt 260
Query: 61 actatctcaatatgaaatgcagatttaagtaggaattataatgggactaatatcacttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actatctcaatatgaaatgcagatttaagtaggaattataatgggactaatatcacttaa 320
Query: 121 gggtatgatttaaaataagctatattcaatcataggtaataatttatgtagtaaagacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggtatgatttaaaataagctatattcaatcataggtaataatttatgtagtaaagacag 380
Query: 181 gcctaaatgttggaatattccaattttccaaagggaaagcttttgccatgaaatttagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctaaatgttggaatattccaattttccaaagggaaagcttttgccatgaaatttagta 440
Query: 241 gcatgataaagattcagtccagaatgcctttcccaagagataggcctaggaatagtgttt 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 gcatgataaagattcagtccagaacgcctttcccaagagataggcctaggaatagtgttt 500
Query: 301 acccggacctta 312
||||||||||||
Sbjct: 501 acccggacctta 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_b14.g1 MSMg01no455_b14.g1 CHROMAT_FILE:
MSMg01no455_b14.g1 PHD_FILE: MSMg01no455_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:31 2005
(535 letters)
>mm_chr12_72164416_72165350
Length = 935
Score = 1015 bits (525), Expect = 0.0
Identities = 534/539 (99%), Gaps = 4/539 (0%)
Strand = Plus / Minus
Query: 1 acctttcctttccattaaacatggcctcaccaacacataagatacataggagctgaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 acctttcctttccattaaacatggcctcaccaacacataagatacataggagctgaaagc 874
Query: 61 caggcacggtagtgcatgcctttaatccccacactcgagagcagaagcaagaaaatgtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 caggcacggtagtgcatgcctttaatccccacactcgagagcagaagcaagaaaatgtct 814
Query: 121 gtgactttgaggccagcatggtctaggacaattagagatacataatagacagaccatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 gtgactttgaggccagcatggtctaggacaattagagatacataatagacagaccatgtc 754
Query: 181 tt----aaaaaaaaaaaaaaaagaacggaaattcttgacagtgtggcaacccataaaatg 236
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ttaaaaaaaaaaaaaaaaaaaagaacggaaattcttgacagtgtggcaacccataaaatg 694
Query: 237 ataagtcatgctatgtagagctcattgggcatggatcagatagtgaatggcaatccttca 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 ataagtcatgctatgtagagctcattgggcatggatcagatagtgaatggcaatccttca 634
Query: 297 taaaaccttaatcaatgaggaggaatacagggggcggaggcgaggtagatgggaaaatac 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 taaaaccttaatcaatgaggaggaatacagggggcggaggcgaggtagatgggaaaatac 574
Query: 357 aaatcaatgtatgcggagataaagccgtacagcacgcacacagattgataggaagcgtgg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aaatcaatgtatgcggagataaagccgtacagcacgcacacagattgataggaagcgtgg 514
Query: 417 tagtttgggagcacaggaatcacctagaggtgattcattcagctacctaatgagcgcttt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tagtttgggagcacaggaatcacctagaggtgattcattcagctacctaatgagcgcttt 454
Query: 477 ctgggtgctgtgcgtctttattctagaagcctcggatctcatcagcgagcaaaaccaac 535
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 453 ctgggtgctgtgcgtctttattctagaagcctcggatctcatcagtgagcaaaaccaac 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
