NNNNNTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCCAGGTTGACTGCAAAGCCTATGGATAAAGCATTTCATG
TATTTTTCCATACCAGTAAGTCTCTTTTGATATCTGCCCATTTATAATCA
AATGCATTTGCAGTTTCCAAACCCCACACTTAAACTTATTAGTATCTAGG
AGATGTGCAGTAATATAGACCATCAAACACAAGAGCCAAGAGCTAGGTTA
CACAGTGTAGATTACTAGAACTGAGGTCAAAAGACCCAGCGTTTGATCTT
GGATTTGAACATAACTTTGTAATAAAATGTAGGTACTGGGGACTTGGATA
CTGGTAATGAAAAGTGACTGGATAACTTTTAGCATTTGATCAGATCACAA
TGGCTGTCCCATTAATCTCTGGGGACATATTTTACAGAAACATGTAGCCA
ACATTTGATGCTAACTTAAGATGCTGTTGGAAATATCTGTAGCTATGAGT
AAGCTATTGTAGAAAAAAGGTGAAAAAGGAGAGCACCCAGGTTAGTCAAA
GCAGAACAAACATTGAGAAAGAGCTCCACCTACTGGCATCTGTTCCCTTA
CAGCTAACGGAAAGACATTCATAACCCACACTGAAGAAGCAGAAAGGTGA
CCTCAGACTTCACTGAAGGAAAACTTCACTGGGGGCTTAGGTTAAGCCAT
TAGGCATGTTCCCCACAGCTGGCTGAACTTCTGATTTTCGCTCACACCTG
GGAGACGAAGAGGTTTTT

CGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGAGTCCCATTTTT
TAATGGGCTTATTTGATTTTCTGGAGTCCACCTTCTTAAGTTCTTTATAT
ATATTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTC
CCAATCTGTTGGTGGTCTTTTTGTCTTATCGACGGTGTCTTTTGCCTTGC
AGAAGCTTTGCAACTTTATGAGGTCCCATTTGTCAATTCTTGATCTTAAA
GCACAAGCCATTGCTGTTCTATTCAGGCATTTTTCCCCTGTACCCATATC
TTCGAGGCTTTTCCCTACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTT
TTATGTGGAGTTCCTTAATCCACTTAGATTTGACCTTAGTACAAGGAAAT
AGCAATGGATCAATTCGCATTCTTCTACATGATGACCACCAGTTGTGCCA
GCACCATTTGTTGAAAATGCTGTCTTTATTTTCACTGGATGGTTTTAGCT
CCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATCTCTGGGTC
TTCAATTCTGTTCCATTGGTCTACTTTGTCTGTCGCTATACCAGTACCAT
GCAGGTTTTATCACAATTGCTCCTGAACACAGGTTTAGGTCCCGGTTGGG
GATTTCCCCCTAGGTTTTTTTTTCTTTGAGAAAAGTTTTGCTATCCTAAG
TTTTTGTTTTTCTAAAGAA

Query= MSMg01no458_b20.b1 MSMg01no458_b20.b1 CHROMAT_FILE:
MSMg01no458_b20.b1 PHD_FILE: MSMg01no458_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:36 2005
         (557 letters)



>mm_chr12_69963093_69964049
          Length = 957

 Score = 1023 bits (529), Expect = 0.0
 Identities = 547/553 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaggttgactgcaaagcctatggataaagcatttcatgtatttttccataccag 64
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggttgacagaaaagcctatggataaagcatttcatgtatttttccataccag 264

                                                                       
Query: 65  taagtctcttttgatatctgcccatttataatcaaatgcatttgcagtttccaaacccca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taagtctcttttgatatctgcccatttataatcaaatgcatttgcagtttccaaacccca 324

                                                                       
Query: 125 cacttaaacttattagtatctaggagatgtgcagtaatatagaccatcaaacacaagagc 184
           ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 325 cacttaaacgtattagtatctaggagatgtgcagtaatatagaccatcgaacacaagagc 384

                                                                       
Query: 185 caagagctaggttacacagtgtagattactagaactgaggtcaaaagacccagcgtttga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caagagctaggttacacagtgtagattactagaactgaggtcaaaagacccagcgtttga 444

                                                                       
Query: 245 tcttggatttgaacataactttgtaataaaatgtaggtactggggacttggatactggta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcttggatttgaacataactttgtaataaaatgtaggtactggggacttggatactggta 504

                                                                       
Query: 305 atgaaaagtgactggataacttttagcatttgatcagatcacaatggctgtcccattaat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgaaaagtgactggataacttttagcatttgatcagatcacaatggctgtcccattaat 564

                                                                       
Query: 365 ctctggggacatattttacagaaacatgtagccaacatttgatgctaacttaagatgctg 424
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 565 ctctggggacatattttacagaaacatgtagccaacatttgatgctaatttaagatgccg 624

                                                                       
Query: 425 ttggaaatatctgtagctatgagtaagctattgtagaaaaaaggtgaaaaaggagagcac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttggaaatatctgtagctatgagtaagctattgtagaaaaaaggtgaaaaaggagagcac 684

                                                                       
Query: 485 ccaggttagtcaaagcagaacaaacattgagaaagagctccacctactggcatctgttcc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccaggttagtcaaagcagaacaaacattgagaaagagctccacctactggcatctgttcc 744

                        
Query: 545 cttacagctaacg 557
           |||||||||||||
Sbjct: 745 cttacagctaacg 757


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space:   518009
Effective search space used:   518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)