MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-459C23
Chromosome	12 (Build37)
Map Location	117,341,768 - 117,341,957
singlet/doublet	singlet
Overlap gene	Vipr2
Upstream gene	Igh, Ighv1-50, Ighv1-51, Ighv1-52, Ighv1-53, EG629930, EG668534, EG211331, Ighv1-55, EG634662, Ighv1-56, EG629936, Ighv8-7, Ighv1-57, Ighv8-8, Ighv1-58, EG432708, Ighv1-60, Ighv1-61, Ighv1-62, EG668544, EG238448, EG668549, EG432709, EG668552, Ighv1-63, Ighv1-64, Ighv8-10, Ighv1-65, EG668554, EG636462, LOC217924, Ighv1-66, EG435328, Ighv1-68, LOC435329, EG668563, Ighv1-69, Ighv8-12, LOC619863, EG638634, EG619886, Ighv1-72, EG668575, EG668577, EG668582, Ighv1-75, Ighv1-77, Ighv1-78, GA_x5J8B7W27DS-1519-2216, Ighv1-79, LOC668586, Ighv1-80, Ighv1-81, Olfr241-ps1, Ighv1-83, EG434609, LOC668595, EG668597, EG668599, Zfp386
Downstream gene	LOC676058, Wdr60, LOC100042963, D12Ertd551e, D430020J02Rik, Ncapg2, Rnu7-ps1, Ptprn2, LOC627375
Link	Open Mouse BAC browser

Click to get alignment info.

name	Igh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:111507 MGI:96442
definition	gene_synonym : MGC118122; MGC118132; MGC19003; MGC25748; MGC6342; MGC68311; MGC91096 note : immunoglobulin heavy chain complex

name	Ighv1-50 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780929 IMGT/GENE-DB:IGHV1-50
definition	note : immunoglobulin heavy variable V1-50

name	Ighv1-51 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780930 IMGT/GENE-DB:IGHV1-51
definition	note : immunoglobulin heavy variable V1-51 pseudo : _no_value

name	Ighv1-52 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382696 IMGT/GENE-DB:IGHV-1-52
definition	note : immunoglobulin heavy variable V1-52

name	Ighv1-53 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780931 IMGT/GENE-DB:IGHV1-53
definition	note : immunoglobulin heavy variable V1-53

name	EG629930 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629930 IMGT/GENE-DB:IGHV8-6 MGI:3645823
definition	gene_synonym : IGHV8-6 note : predicted gene, EG629930

name	EG668534 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668534 MGI:3646995
definition	note : predicted gene, EG668534 pseudo : _no_value

name	EG211331 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211331 IMGT/GENE-DB:IGHV1-54 MGI:3647133
definition	gene_synonym : IgH; IGHV1-54; VH note : predicted gene, EG211331

name	Ighv1-55 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780932 IMGT/GENE-DB:IGHV1-55
definition	note : immunoglobulin heavy variable V1-55

name	EG634662 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:634662 MGI:3646714
definition	note : predicted gene, EG634662 pseudo : _no_value

name	Ighv1-56 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382695 IMGT/GENE-DB:IGHV1-56
definition	note : immunoglobulin heavy variable V1-56

name	EG629936 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629936 MGI:3645821
definition	note : predicted gene, EG629936 pseudo : _no_value

name	Ighv8-7 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780936 IMGT/GENE-DB:IGHV8-7
definition	note : immunoglobulin heavy variable V8-7 pseudo : _no_value

name	Ighv1-57 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780937 IMGT/GENE-DB:IGHV1-57
definition	note : immunoglobulin heavy variable V1-57

name	Ighv8-8 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780938 IMGT/GENE-DB:IGHV8-8
definition	note : immunoglobulin heavy variable V8-8

name	Ighv1-58 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780939 IMGT/GENE-DB:IGHV1-58
definition	note : immunoglobulin heavy variable V1-58

name	EG432708 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432708 IMGT/GENE-DB:IGHV1-59 MGI:3644474
definition	gene_synonym : IgH; IGHV1-59 note : predicted gene, EG432708

name	Ighv1-60 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780940 IMGT/GENE-DB:IGHV1-60
definition	note : immunoglobulin heavy variable V1-60 pseudo : _no_value

name	Ighv1-61 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674018 IMGT/GENE-DB:IGHV1-61
definition	gene_synonym : Vh3 note : immunoglobulin heavy variable V1-61

name	Ighv1-62 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668542 IMGT/GENE-DB:IGHV1-62
definition	note : immunoglobulin heavy variable V1-62 pseudo : _no_value

name	EG668544 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668544 IMGT/GENE-DB:IGHV1-62-1 MGI:3704125
definition	gene_synonym : Ighv1-62-1 note : predicted gene, EG668544

name	EG238448 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238448 IMGT/GENE-DB:IGHV1-62-2 MGI:3644968
definition	gene_synonym : IGHV1-62-2 note : predicted gene, EG238448

name	EG668549 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668549 IMGT/GENE-DB:IGHV1-63-1 MGI:3648544
definition	gene_synonym : IGHV1-62-3 note : predicted gene, EG668549

name	EG432709 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432709 IMGT/GENE-DB:IGHV8-9 MGI:3644475
definition	gene_synonym : IGHV8-9 note : predicted gene, EG432709

name	EG668552 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668552 MGI:3645301
definition	note : predicted gene, EG668552 pseudo : _no_value

name	Ighv1-63 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780956 IMGT/GENE-DB:IGHV1-63
definition	note : immunoglobulin heavy variable V1-63

name	Ighv1-64 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:380823 IMGT/GENE-DB:IGHV1-64
definition	note : immunoglobulin heavy variable V1-64

name	Ighv8-10 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780957 IMGT/GENE-DB:IGHV8-10
definition	note : immunoglobulin heavy variable V8-10 pseudo : _no_value

name	Ighv1-65 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780958 IMGT/GENE-DB:IGHV1-65
definition	note : immunoglobulin heavy variable V1-65 pseudo : _no_value

name	EG668554 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668554 MGI:3645306
definition	note : predicted gene, EG668554 pseudo : _no_value

name	EG636462 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:636462 IMGT/GENE-DB:IGHV8-11 MGI:3644925
definition	gene_synonym : IGHV8-11 note : predicted gene, EG636462

name	LOC217924 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:217924
definition	note : ribosomal protein L7a pseudogene pseudo : _no_value

name	Ighv1-66 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:380824 IMGT/GENE-DB:IGHV1-66
definition	note : immunoglobulin heavy variable V1-66

name	EG435328 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435328 IMGT/GENE-DB:IGHV1-67 MGI:3645228
definition	gene_synonym : IGHV1-67 note : predicted gene, EG435328

name	Ighv1-68 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780959 IMGT/GENE-DB:IGHV1-68
definition	note : immunoglobulin heavy variable V1-68

name	LOC435329 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435329
definition	note : cell division cycle 5-like pseudogene pseudo : _no_value

name	EG668563 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668563 MGI:3648326
definition	note : predicted gene, EG668563 pseudo : _no_value

name	Ighv1-69 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619833 IMGT/GENE-DB:IGHV1-69
definition	note : immunoglobulin heavy variable V1-69

name	Ighv8-12 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:780960 IMGT/GENE-DB:IGHV8-12
definition	note : immunoglobulin heavy variable V8-12

name	LOC619863 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619863
definition	note : high mobility group box 2 pseudogene pseudo : _no_value

name	EG638634 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:638634 IMGT/GENE-DB:IGHV1-70 MGI:3644620
definition	gene_synonym : IGHV1-70 note : predicted gene, EG638634

name	EG619886 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619886 IMGT/GENE-DB:IGHV1-71 MGI:3643033
definition	gene_synonym : IGHV1-71 note : predicted gene, EG619886

name	Ighv1-72 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619916
definition	note : immunoglobulin heavy variable V1-72

name	EG668575 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668575 MGI:3645129
definition	note : predicted gene, EG668575 pseudo : _no_value

name	EG668577 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668577 IMGT/GENE-DB:IGHV1-73 MGI:3645131
definition	gene_synonym : Ighv1-73 note : predicted gene, EG668577

name	EG668582 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668582 IMGT/GENE-DB:IGHV8-14 MGI:3648977
definition	gene_synonym : IGHV8-14 note : predicted gene, EG668582

name	Ighv1-75 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622728 IMGT/GENE-DB:IGHV1-75
definition	note : immunoglobulin heavy variable V1-75

name	Ighv1-77 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619994 IMGT/GENE-DB:IGHV1-77
definition	gene_synonym : IgH note : immunoglobulin heavy variable V1-77

name	Ighv1-78 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:213570
definition	note : immunoglobulin heavy variable V1-78

name	GA_x5J8B7W27DS-1519-2216 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:257855
definition	note : olfactory receptor GA_x5J8B7W27DS-1519-2216 pseudo : _no_value

name	Ighv1-79 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435331 IMGT/GENE-DB:IGHV1-79
definition	note : immunoglobulin heavy variable V1-79

name	LOC668586 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668586
definition	note : signaling molecule ATTP pseudogene pseudo : _no_value

name	Ighv1-80 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668589 IMGT/GENE-DB:IGHV1-80
definition	note : immunoglobulin heavy variable V1-80

name	Ighv1-81 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668591 IMGT/GENE-DB:IGHV1-81
definition	note : immunoglobulin heavy variable V1-81

name	Olfr241-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404357 MGI:3030075
definition	gene_synonym : MOR179-8_p note : olfactory receptor 241, pseudogene 1 pseudo : _no_value

name	Ighv1-83 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620140 IMGT/GENE-DB:IGHV1-83
definition	note : immunoglobulin heavy variable V1-83

name	EG434609 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434609 IMGT/GENE-DB:IGHV1-84 MGI:3644235
definition	gene_synonym : IgH; IGHV1-84 note : predicted gene, EG434609

name	LOC668595 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668595
definition	note : ornithine decarboxylase, structural 1 pseudogene pseudo : _no_value

name	EG668597 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668597 IMGT/GENE-DB:IGHV1-85 MGI:3645723
definition	gene_synonym : IGHV1-85 note : predicted gene, EG668597

name	EG668599 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668599 IMGT/GENE-DB:IGHV1-86 MGI:3645729
definition	gene_synonym : Ighv1-86 note : predicted gene, EG668599

name	Zfp386 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56220 MGI:1930708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Vipr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22355 MGI:107166
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC676058 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	Wdr60 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:217935 MGI:2445085
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042963 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs

name	D12Ertd551e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52635 MGI:1261845
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D430020J02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319545 MGI:2442237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 26 ESTs

name	Ncapg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76044 MGI:1923294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnu7-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19867 MGI:97993
definition	note : U7 small nuclear RNA, pseudogene 1 pseudo : _no_value

name	Ptprn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19276 MGI:107418
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627375 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627375
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 619 ESTs, 10 Proteins

name	Zfp386 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93102384 GeneID:56220 MGI:1930708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 386 (Kruppel-like) transcript_id : NM_001004066.2

name	Zfp386 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93102383 GeneID:56220 MGI:1930708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 386 (Kruppel-like) transcript_id : NM_019565.3

name	Vipr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678574 GeneID:22355 MGI:107166
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vasoactive intestinal peptide receptor 2 transcript_id : NM_009511.1

name	Wdr60 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113199780 GeneID:217935 MGI:2445085
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 60 transcript_id : NM_146039.3

name	LOC100042963 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263571 GeneID:100042963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs product : hypothetical protein LOC100042963 transcript_id : XM_001478482.1

name	D12Ertd551e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76096371 GeneID:52635 MGI:1261845
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 12, ERATO Doi 551, expressed transcript_id : NM_028731.5

name	D430020J02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263562 GeneID:319545 MGI:2442237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 26 ESTs product : RIKEN cDNA D430020J02 gene transcript_id : XM_001478239.1

name	Ncapg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91208438 GeneID:76044 MGI:1923294
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : non-SMC condensin II complex, subunit G2 transcript_id : NM_133762.3

name	Ptprn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859597 GeneID:19276 MGI:107418
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, receptor type, N polypeptide 2 transcript_id : NM_011215.1

name	LOC627375 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263573 GeneID:627375
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 619 ESTs, 10 Proteins product : similar to high mobility group nucleosomal binding domain 2 transcript_id : XM_001478560.1

name	Ighv1-50 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780929 IMGT/GENE-DB:IGHV1-50
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv1-51 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780930 IMGT/GENE-DB:IGHV1-51
definition	codon_start : 1 pseudo : _no_value

name	Ighv1-52 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:382696 IMGT/GENE-DB:IGHV-1-52
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv1-53 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780931 IMGT/GENE-DB:IGHV1-53
definition	codon_start : 1 exception : rearrangement required for product

name	EG629930 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:629930 IMGT/GENE-DB:IGHV8-6 MGI:3645823
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IGHV8-6

name	EG211331 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:211331 IMGT/GENE-DB:IGHV1-54 MGI:3647133
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IgH; IGHV1-54; VH

name	Ighv1-55 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780932 IMGT/GENE-DB:IGHV1-55
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv1-56 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:382695 IMGT/GENE-DB:IGHV1-56
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv8-7 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780936 IMGT/GENE-DB:IGHV8-7
definition	codon_start : 1 pseudo : _no_value

name	Ighv1-57 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780937 IMGT/GENE-DB:IGHV1-57
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv8-8 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780938 IMGT/GENE-DB:IGHV8-8
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv1-58 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780939 IMGT/GENE-DB:IGHV1-58
definition	codon_start : 1 exception : rearrangement required for product

name	EG432708 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:432708 IMGT/GENE-DB:IGHV1-59 MGI:3644474
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IgH; IGHV1-59

name	Ighv1-60 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780940 IMGT/GENE-DB:IGHV1-60
definition	codon_start : 1 pseudo : _no_value

name	Ighv1-61 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:674018 IMGT/GENE-DB:IGHV1-61
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : Vh3

name	Ighv1-62 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:668542 IMGT/GENE-DB:IGHV1-62
definition	codon_start : 1 pseudo : _no_value

name	EG668544 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:668544 IMGT/GENE-DB:IGHV1-62-1 MGI:3704125
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : Ighv1-62-1

name	EG238448 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:238448 IMGT/GENE-DB:IGHV1-62-2 MGI:3644968
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IGHV1-62-2

name	EG668549 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:668549 IMGT/GENE-DB:IGHV1-63-1 MGI:3648544
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IGHV1-62-3

name	EG432709 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:432709 IMGT/GENE-DB:IGHV8-9 MGI:3644475
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IGHV8-9

name	Ighv1-63 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780956 IMGT/GENE-DB:IGHV1-63
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv1-64 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:380823 IMGT/GENE-DB:IGHV1-64
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv8-10 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780957 IMGT/GENE-DB:IGHV8-10
definition	codon_start : 1 pseudo : _no_value

name	Ighv1-65 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780958 IMGT/GENE-DB:IGHV1-65
definition	codon_start : 1 pseudo : _no_value

name	EG636462 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:636462 IMGT/GENE-DB:IGHV8-11 MGI:3644925
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IGHV8-11

name	Ighv1-66 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:380824 IMGT/GENE-DB:IGHV1-66
definition	codon_start : 1 exception : rearrangement required for product

name	EG435328 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:435328 IMGT/GENE-DB:IGHV1-67 MGI:3645228
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IGHV1-67

name	Ighv1-68 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780959 IMGT/GENE-DB:IGHV1-68
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv1-69 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:619833 IMGT/GENE-DB:IGHV1-69
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv8-12 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:780960 IMGT/GENE-DB:IGHV8-12
definition	codon_start : 1 exception : rearrangement required for product

name	EG638634 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:638634 IMGT/GENE-DB:IGHV1-70 MGI:3644620
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IGHV1-70

name	EG619886 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:619886 IMGT/GENE-DB:IGHV1-71 MGI:3643033
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IGHV1-71

name	Ighv1-72 (CDS detail)
type	CDS
link	vega ensembl
xref	IMGT/GENE-DB:IGHV1-72 GeneID:619916
definition	codon_start : 1 exception : rearrangement required for product

name	EG668577 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:668577 IMGT/GENE-DB:IGHV1-73 MGI:3645131
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : Ighv1-73

name	EG668582 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:668582 IMGT/GENE-DB:IGHV8-14 MGI:3648977
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IGHV8-14

name	Ighv1-75 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:622728 IMGT/GENE-DB:IGHV1-75
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv1-77 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:619994 IMGT/GENE-DB:IGHV1-77
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IgH

name	Ighv1-78 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:213570
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv1-79 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:435331 IMGT/GENE-DB:IGHV1-79
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv1-80 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:668589 IMGT/GENE-DB:IGHV1-80
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv1-81 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:668591 IMGT/GENE-DB:IGHV1-81
definition	codon_start : 1 exception : rearrangement required for product

name	Ighv1-83 (CDS detail)
type	CDS
link	vega ensembl
xref	GeneID:620140 IMGT/GENE-DB:IGHV1-83
definition	codon_start : 1 exception : rearrangement required for product

name	EG434609 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:434609 IMGT/GENE-DB:IGHV1-84 MGI:3644235
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IgH; IGHV1-84

name	EG668597 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:668597 IMGT/GENE-DB:IGHV1-85 MGI:3645723
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : IGHV1-85

name	EG668599 (CDS detail)
type	CDS
link	vega ensembl MGI
xref	GeneID:668599 IMGT/GENE-DB:IGHV1-86 MGI:3645729
definition	codon_start : 1 exception : rearrangement required for product gene_synonym : Ighv1-86

name	Zfp386 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62526048 CCDS:CCDS26209.1 GeneID:56220 MGI:1930708
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; kruppel-like protein; Kruppel associated box (KRAB) zinc finger 1 product : zinc finger protein 386 (Kruppel-like) isoform a protein_id : NP_001004066.1

name	Zfp386 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62526050 GeneID:56220 MGI:1930708
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; kruppel-like protein; Kruppel associated box (KRAB) zinc finger 1 product : zinc finger protein 386 (Kruppel-like) isoform b protein_id : NP_062511.2

name	Vipr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678575 CCDS:CCDS26210.1 GeneID:22355 MGI:107166
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0004999 - vasoactive intestinal polypeptide receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : VIP receptor subtype 2; VPAC2 receptor product : vasoactive intestinal peptide receptor 2 protein_id : NP_033537.1

name	Wdr60 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113199781 GeneID:217935 MGI:2445085
definition	codon_start : 1 product : WD repeat domain 60 protein_id : NP_666151.3

name	LOC100042963 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263572 GeneID:100042963
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478532.1

name	D12Ertd551e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67782360 CCDS:CCDS26211.1 GeneID:52635 MGI:1261845
definition	codon_start : 1 product : chr2 synaptotagmin protein_id : NP_083007.2

name	D430020J02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263563 GeneID:319545 MGI:2442237
definition	codon_start : 1 product : hypothetical protein LOC319545 protein_id : XP_001478289.1

name	Ncapg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91208439 CCDS:CCDS26212.1 GeneID:76044 MGI:1923294
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0001833 - inner cell mass cell proliferation [Evidence IMP] codon_start : 1 note : more than blood product : leucine zipper protein 5 protein_id : NP_598523.3

name	Ptprn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859598 GeneID:19276 MGI:107418
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IEA]; GO:0007185 - transmembrane receptor protein tyrosine phosphatase signaling pathway [Evidence IEA] codon_start : 1 exception : mismatches in translation note : protein tyrosine phosphatase, receptor-type, N polypeptide 2; IA-2 beta; snoRNA MBII-51 product : protein tyrosine phosphatase, receptor type, N polypeptide 2 protein_id : NP_035345.1

name	LOC627375 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263574 GeneID:627375
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478610.1

name	Ighv1-50 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780929
definition	standard_name : IGHV1-50

name	Ighv1-51 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780930
definition	pseudo : _no_value standard_name : IGHV1-51

name	Ighv1-52 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:382696
definition	standard_name : IGHV1-52

name	Ighv1-53 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780931
definition	standard_name : IGHV1-53

name	EG629930 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:629930
definition	gene_synonym : IGHV8-6 standard_name : IGHV8-6

name	EG211331 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:211331
definition	gene_synonym : IgH; IGHV1-54; VH standard_name : IGHV1-54

name	Ighv1-55 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780932
definition	standard_name : IGHV1-55

name	Ighv1-56 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:382695
definition	standard_name : IGHV1-56

name	Ighv8-7 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780936
definition	pseudo : _no_value standard_name : IGHV807

name	Ighv1-57 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780937
definition	standard_name : IGHV1-57

name	Ighv8-8 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780938
definition	standard_name : IGHV8-8

name	Ighv1-58 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780939
definition	standard_name : IGHV1-58

name	EG432708 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:432708
definition	gene_synonym : IgH; IGHV1-59 standard_name : IGHV1-59

name	Ighv1-60 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780940
definition	pseudo : _no_value standard_name : IGHV1-60

name	Ighv1-61 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:674018
definition	gene_synonym : Vh3 standard_name : IGHV1-61

name	Ighv1-62 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:668542
definition	pseudo : _no_value standard_name : IGHV1-62

name	EG668544 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:668544
definition	gene_synonym : Ighv1-62-1 standard_name : IGHV1-62-1

name	EG238448 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:238448
definition	gene_synonym : IGHV1-62-2 standard_name : IGHV1-62-2

name	EG668549 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:668549
definition	gene_synonym : IGHV1-62-3 standard_name : IGHV1-62-3

name	EG432709 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:432709
definition	gene_synonym : IGHV8-9 standard_name : IGHV8-9

name	Ighv1-63 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780956
definition	standard_name : IGHV1-63

name	Ighv1-64 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:380823
definition	standard_name : IGHV1-64

name	Ighv8-10 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780957
definition	pseudo : _no_value standard_name : IGHV8-10

name	Ighv1-65 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780958
definition	pseudo : _no_value standard_name : IGHV1-65

name	EG636462 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:636462
definition	gene_synonym : IGHV8-11 standard_name : IGHV8-11

name	Ighv1-66 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:380824
definition	standard_name : IGHV1-66

name	EG435328 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:435328
definition	gene_synonym : IGHV1-67 standard_name : IGHV1-67

name	Ighv1-68 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780959
definition	standard_name : IGHV1-68

name	Ighv1-69 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:619833
definition	standard_name : IGHV1-69

name	Ighv8-12 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:780960
definition	standard_name : IGHV8-12

name	EG638634 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:638634
definition	gene_synonym : IGHV1-70 standard_name : IGHV1-70

name	EG619886 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:619886
definition	gene_synonym : IGHV1-71 standard_name : IGHV1-71

name	Ighv1-72 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:619916
definition	standard_name : IGHV1-72

name	EG668577 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:668577
definition	gene_synonym : Ighv1-73 standard_name : IGHV1-73

name	EG668582 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:668582
definition	gene_synonym : IGHV8-14 standard_name : IGHV8-14

name	Ighv1-75 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:622728
definition	standard_name : IGHV1-75

name	Ighv1-77 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:619994
definition	gene_synonym : IgH standard_name : IGHV1-77

name	Ighv1-78 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:213570
definition	standard_name : IGHV1-78

name	Ighv1-79 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:435331
definition	standard_name : IGHV1-79

name	Ighv1-80 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:668589
definition	standard_name : IGHV1-80

name	Ighv1-81 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:668591
definition	standard_name : IGHV1-81

name	Ighv1-83 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:620140
definition	standard_name : IGHV1-83

name	EG434609 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:434609
definition	gene_synonym : IgH; IGHV1-84 standard_name : IGHV1-84

name	EG668597 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:668597
definition	gene_synonym : IGHV1-85 standard_name : IGHV1-85

name	EG668599 (CDS detail)
type	V_segment
link	vega ensembl
xref	GeneID:668599
definition	gene_synonym : Ighv1-86 standard_name : IGHV1-86

name	LOC676058 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263561 GeneID:676058
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to ribosomal protein L32 pseudo : _no_value transcript_id : XR_033601.1

clone name	MSMg01-045I04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-479K11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-508B17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-428L21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-080I05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-083G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525G06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-389K24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-500J11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-518F14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-233N06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-475H14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-528J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116F10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-359A05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-534D20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-052F24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-506D14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-523L14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-424N20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-430N03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-503O05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-156N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065F08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-459C23.T7 (MSMg01no459_c23.b1)	MSMg01-459C23.TJ (MSMg01no459_c23.g1)
ACC	AG544839	AG544840
length	763	813
length of high quality (start - end)	194 (41 - 234)	51 (67 - 117)
definition	CHROMAT_FILE: MSMg01no459_c23.b1 PHD_FILE: MSMg01no459_c23.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:32:00 2005	CHROMAT_FILE: MSMg01no459_c23.g1 PHD_FILE: MSMg01no459_c23.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:32:01 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC AGCAAATGACCTATTCACTTCTTCAAGTATAATTGGGATCCTAGACCTCA CTTCTGATACACTGTTGTAGGCTGCTTTCTATGCCACATCTGAGACTGTG TTCTTGAGAGTACAGTGTGGTCCACAGGTAGATGATGTGACTGATAGGGG GCCTTGTTGGGAGTAAGGGATTACCTGGGGAGGNNGGCATAATAAAGAAG AACCTTGGGGTNNAAAACCCCCCCCAACCCTTTGGTGGGGGTGGGCGCCG GTTTCAATTTTTTCCCTCGTGGGGCCCTCCACTTTTTTGGGTNAGTTCTC TTCCTCTTTCTCTTCCCCTCTTTTTTTCCTTTTCCTCCTCTCTTTCCTCT ACTTTTTCCCTCTTTTCCCCTTTCCCCTTTCTCCCCCCATTTTTTTCCTT CTTCTTCCTCCCTTCCCTCTTTTGCCTTCCCCCCCCTTTTTTTTTTTTTC CTTTTTTTTCTCTCCCTTTTCCTTTTCCTCCCCCTTTTCTCTTTTTTTCC TCTCTTTTTCCCTCCTTTTCTTCTTCCCTTTTTTTCCCCTTTCCTTCTCC TTTCCCTTCTCCTTTTTTCTTCCCTTTTTTTTCCCTTCTTTTTTTTTTCC TTTTTATCTCTACCCCCCCTTTCTCTTTCCCCCTCATTTCTTCTATTTCC TTTCTTTTTTTATTTCGCCCGCCTTTTTTCTCCCCACTCCTTTCTTCCTT TACTTTCCTTTTG	TGCAGTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXTTCTCTTTTGTGTCCTAACCCACTGGGGGGGGGG GGGCTTACCTTGAGGTTCTTGTTTGAGATCCTGAGTCTTTGGATTCCAGA CCTACCTCTCTCCCGGGGTTCCTCCACTGACCCTCTTTCTTCATGTTTCG AACTGTCTTCTTCTTTTTTTTGTCCTGCCCGCTTCGCCCCCCTGCTCCTT TTCGTTTTCAGCGTCCTATCCTTCCCCTTTTTGCCCCCTCCCCCCTCGCT TTACTCACCTCCCTTTTTTTATTGCTCCCCCTCCTCCTTTCTCCCCCTCT TTCTCCCTCCCTCCCTTCTTCTCGCTTCCTTTCTCCCTTTTCCCCTTTTT TCCCCCCCTCTGTCTCCTTCTGTCAATTATTCCCCCCCTCCCATCCTTCT CTTAACCTCTTACCTTCATCTTTTCCTCTTTCTTCTTTTTCTCCTACTCT CCTATGTATTTCCTTTTATTTCCTCTTCTGCCTCCGCTCTCCCCCCTAAT TTCCCCCCCCTCTTTTTCTCATTACTCTCTCACCTTTCTCTTTTTTTTCT AACCACATTTTTCCCCCTCCCCACTTTTATCTTTCTCTGTTTACTCGAAA CCCTCTTCCTTTTCTCGTTTCTCCCTCCCTAATTTTTCTCTCCCTCTTTC TTCCAATCCACTCTCCCTCTTTTACTCCCTAACTTTTCTTATCATTCCCC TTATTTTATTTTTTCTTTTTTTTCTTTTATCCTCTCTCTCTTCCCATTCC TTTTGTTTCACTC
quality values	Open. Hide. 12 12 20 23 37 37 37 37 32 30 29 28 23 20 25 28 28 28 44 46 30 26 28 19 22 10 15 11 10 10 10 10 21 23 37 25 28 28 28 28 31 59 53 57 36 36 36 36 35 30 30 28 30 33 22 22 15 16 13 13 13 30 30 28 28 31 31 31 31 48 53 35 22 17 8 8 10 23 35 53 53 53 48 50 50 53 50 50 50 44 48 48 48 48 57 57 47 47 42 50 50 50 57 68 68 68 68 54 54 54 54 57 57 57 59 59 59 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 57 57 57 57 47 50 57 57 57 57 43 43 50 57 57 57 57 57 68 68 68 68 68 57 57 57 57 57 54 54 57 57 57 59 59 57 57 57 59 59 59 59 57 59 59 59 59 50 47 47 50 50 50 50 50 53 54 57 54 53 50 50 50 50 54 57 57 59 59 59 59 57 59 48 48 48 48 48 48 48 48 48 48 59 59 47 47 47 47 47 47 48 48 41 59 59 47 44 25 25 3 0 0 3 14 15 33 19 15 8 8 8 17 17 11 11 11 10 10 10 10 10 8 9 9 10 12 9 3 0 0 3 10 12 13 11 12 15 22 21 15 12 8 8 7 7 8 8 8 8 8 8 10 8 8 8 8 8 8 8 10 10 13 12 8 8 8 8 8 8 7 7 7 9 10 10 15 27 22 16 13 13 13 13 15 13 9 9 10 6 7 6 6 8 10 10 10 7 7 8 8 10 10 10 10 8 8 8 8 3 0 3 6 9 9 8 8 8 8 8 8 6 6 8 8 13 13 8 8 8 8 8 8 15 15 28 21 21 19 15 14 18 10 10 8 8 10 18 15 11 11 12 12 10 8 8 6 6 8 8 8 9 13 10 8 8 10 8 8 8 8 8 9 17 12 14 16 10 8 8 8 8 10 12 10 10 8 8 8 8 8 10 11 10 9 8 8 13 12 14 12 12 13 8 8 7 7 7 10 13 15 15 10 8 8 8 10 8 10 8 8 9 11 8 8 8 8 8 8 8 8 8 8 9 10 10 18 18 13 10 6 6 6 10 8 10 10 12 17 24 13 12 10 10 10 9 9 10 16 12 12 12 11 10 10 9 10 16 10 9 10 10 17 12 10 12 10 27 12 12 10 12 10 11 12 12 15 18 9 10 10 10 13 13 9 9 9 10 14 16 14 15 15 10 12 8 8 6 7 7 12 12 12 10 9 9 11 10 10 12 12 10 10 13 9 9 9 10 8 10 11 15 14 15 23 16 18 15 15 13 10 9 11 11 12 13 23 28 25 22 9 11 10 10 10 10 18 18 12 12 9 8 9 6 8 8 8 6 6 8 8 9 8 8 8 8 8 12 12 14 17 20 17 15 8 9 8 8 8 16 16 10 8 8 8 8 15 12 16 11 11 12 11 10 12 14 17 19 19 17 15 25 14 18 11 11 11 12 12 17 21 17 11 11 8 10 10 10 8 8 8 10 17 17 18 21 17 14 13 13 8 10 9 7 10 7 11 15 12 15 10 10 8 10 10 19 19 17 14 18 18 11 11 9 13 10 8 8 8 10 6 6 8 8 25 29 23 21 12 8 7 10 10 8 8 8 13 8 8 8 11 9 20 18 14 9 8 8 8 8 15 13 8 9 9 11 13 19 15 16 14 10 10 6 6 8 8 13 6 6 6 7 10 10 10 10 11 15 19 12 12	Open. Hide. 8 8 8 8 8 9 10 9 9 10 10 16 27 31 37 36 27 21 12 12 16 21 16 24 25 13 7 6 6 6 6 6 6 8 8 10 21 19 37 37 37 37 36 33 33 36 33 33 37 37 37 37 27 22 11 9 8 8 8 10 9 10 8 21 21 31 26 28 41 48 50 53 53 53 53 50 50 50 50 50 50 59 59 59 57 48 48 48 48 50 57 57 57 59 59 59 59 59 68 59 59 43 41 39 37 59 59 57 46 47 39 32 23 23 21 13 13 13 12 18 23 18 12 12 12 19 19 20 20 18 26 28 28 20 22 17 17 17 15 22 15 15 15 19 19 19 14 15 15 12 12 11 8 8 8 8 8 10 11 11 15 13 11 11 9 10 8 8 8 8 10 13 13 12 15 10 10 8 8 8 8 8 8 8 8 8 8 10 10 10 9 9 9 9 13 14 14 10 12 11 11 11 16 12 11 11 11 12 12 12 9 9 9 9 9 13 21 25 19 16 8 8 8 8 8 8 8 10 13 15 13 8 8 8 6 6 8 10 8 9 8 8 8 8 8 8 9 10 8 8 8 11 7 9 10 10 10 8 6 6 6 8 8 8 8 10 8 8 8 8 8 8 10 8 9 10 10 10 10 10 10 8 8 10 8 8 8 8 8 8 8 8 8 10 7 7 8 8 10 13 10 8 6 6 8 8 8 9 9 9 10 10 15 17 16 23 11 9 8 8 6 6 10 8 8 8 8 8 10 10 11 10 10 10 8 8 8 12 8 8 8 6 6 6 10 10 10 9 10 10 13 10 9 9 10 7 6 6 8 8 10 10 10 10 13 10 10 10 8 8 6 6 6 6 6 6 9 10 9 9 8 8 8 8 8 8 8 8 8 8 9 9 12 13 12 12 8 8 9 12 9 9 9 10 9 9 9 9 9 10 8 10 10 10 10 8 8 10 8 8 6 7 10 8 11 11 8 10 10 10 10 10 15 12 14 12 10 12 9 9 8 8 8 8 12 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 9 9 10 9 9 8 8 8 8 8 8 10 15 13 10 10 10 11 11 12 12 15 15 16 14 14 9 8 8 8 8 8 10 10 8 6 6 10 10 10 10 8 10 6 6 6 6 8 10 15 18 19 18 16 8 8 8 8 8 11 8 10 9 9 11 11 12 10 6 6 6 10 8 8 8 8 8 8 10 9 9 10 16 16 16 10 8 8 8 8 8 9 10 13 12 10 9 9 15 13 13 9 15 15 13 11 12 10 8 8 8 8 8 8 8 8 8 6 6 8 6 6 8 15 13 10 10 11 18 15 15 15 15 15 19 12 16 12 12 9 9 10 10 10 6 6 6 6 12 12 22 28 24 22 18 16 12 12 12 22 8 8 6 6 8 6 9 7 7 6 8 8 10 12 19 15 15 9 9 8 7 6 6 8 8 6 6 8 8 8 8 10 10 10 8 8 8 8 10 8 9 12 10 10 8 8 11 11 18 15 15 12 12 11 12 12 10 12 10 8 8 8 8 8 8 10 19 19 14 20 20 18 18 13 14 17 14 15 10 10 10 13 13 16 12 10 13 8 10 6 6 8 8 14 13 13 12 11 8 8 8 8 8 8 8 8 9 9 13 10 10 10 10 10 19 10 12 8 8 7 6 8 8 9 11 12 12 14 18 15 15 10 9 10 10 10 9 9 9 12 12 16 11 10 10 8 8 8 12 19 12 10 9 9 9 8 12 7 6 8 8 9 9 12 12 17 17 17 18 15 15 14 7 7 8 6 6 8 8 8 9 12 14 9 9 9 9 9 8 8 8 10 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no459_c23.b1 MSMg01no459_c23.b1 CHROMAT_FILE:
MSMg01no459_c23.b1 PHD_FILE: MSMg01no459_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:00 2005
         (194 letters)



>mm_chr12_117341564_117342158
          Length = 595

 Score =  344 bits (178), Expect = 2e-99
 Identities = 187/190 (98%), Gaps = 1/190 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagcaaatgacctattcacttcttcaa-gtataattgggatcctagacctcactt 63
           ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 gaattcagcaaatgaactattcacttcttcaaagtataattgggatcctagacctcactt 264

                                                                       
Query: 64  ctgatacactgttgtaggctgctttctatgccacatctgagactgtgttcttgagagtac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgatacactgttgtaggctgctttctatgccacatctgagactgtgttcttgagagtac 324

                                                                       
Query: 124 agtgtggtccacaggtagatgatgtgactgatagggggccttgttgggagtaagggatta 183
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 325 agtgtggtccacaggtagatgatgtgactggtagggggccttgttgggagtaagggatta 384

                     
Query: 184 cctggggagg 193
           ||||||||||
Sbjct: 385 cctggggagg 394


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 595
Length adjustment: 8
Effective length of query: 186
Effective length of database: 587
Effective search space:   109182
Effective search space used:   109182
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information