Query= MSMg01no461_c03.b1 MSMg01no461_c03.b1 CHROMAT_FILE:
MSMg01no461_c03.b1 PHD_FILE: MSMg01no461_c03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:36 2005
(249 letters)
>mm_chr12_94930809_94931457
Length = 649
Score = 414 bits (214), Expect = e-120
Identities = 238/246 (96%)
Strand = Plus / Minus
Query: 4 aaaaccaatgaccatatttaaaaataaagccatgggtctaaatggagtcttcctcattca 63
||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 570 aaaacaaatgaccatatttaaaaatagagccatgggtctaaatggagtcttcttcattca 511
Query: 64 ctgctcattgaaatgcaaactgtggcagcctgcactggaaattactctagagaattctca 123
|||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 510 ctgctcattgaaatgcaagctgtggcagcctgcgctggaaattactgtagagaattctca 451
Query: 124 acacaatatatttagatatactgcaaaaaaagaaaaaaagaaagaaaatatccaataaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 acacaatatatttagatatactgcaaaaaaagaaaaaaagaaagaaaatatccaataaaa 391
Query: 184 aaccagttcatcaactttatctttcatatacctctatattttgaaatgactacttaagca 243
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 390 aaccagttcatcaactttatccttcatatacatctatattttgaaatgactacttaagca 331
Query: 244 ttcaga 249
||||||
Sbjct: 330 ttcaga 325
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_c03.g1 MSMg01no461_c03.g1 CHROMAT_FILE:
MSMg01no461_c03.g1 PHD_FILE: MSMg01no461_c03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:37 2005
(247 letters)
>mm_chr12_94785962_94786607
Length = 646
Score = 453 bits (234), Expect = e-132
Identities = 243/246 (98%), Gaps = 1/246 (0%)
Strand = Plus / Plus
Query: 1 atggttctcaagtctaaaatggaaaagaaaaataccacatgtgtctatagaaatgacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atggttctcaagtctaaaatggaaaagaaaaataccacatgtgtctatagaaatgacatt 260
Query: 61 ttaaatgatctctgttaaggcttattttagaaatgggataaaagatagaaaagaaacctc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 ttaaatgatctctgttaaggcttattttagaaatgggataaaagatagaaaacaaacctc 320
Query: 121 acacttagtttattccaaaggtggataagaaatacctgctttaattaaatgaaataaaag 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacttagattattccaaaggtggataagaaatacctgctttaattaaatgaaataaaag 380
Query: 181 ttcaaaatactaaggtaaattaaaaaaaaaaaaaacaatgcactgcaaactttggcctga 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 ttcaaaatactaaggtaaattaaaaaaaaaaaaa-caatgcactgcaaactttggcctga 439
Query: 241 tactcc 246
||||||
Sbjct: 440 tactcc 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 646
Length adjustment: 9
Effective length of query: 238
Effective length of database: 637
Effective search space: 151606
Effective search space used: 151606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
