Query= MSMg01no462_g10.b1 MSMg01no462_g10.b1 CHROMAT_FILE:
MSMg01no462_g10.b1 PHD_FILE: MSMg01no462_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:24 2005
(273 letters)
>mm_chr12_35192161_35192832
Length = 672
Score = 462 bits (239), Expect = e-135
Identities = 264/277 (95%), Gaps = 9/277 (3%)
Strand = Plus / Plus
Query: 1 tttactatattctcttttgaaaacagaagatttagatacaaaagtctgcctgtcatccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttactatattctcttttgaaaacagaagatttagatacaaaagtctgcctgtcatccta 260
Query: 61 ctgttgttacagtacagaagaaacacaatgtccaggcttatggtgaagaagcaaaagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgttgttacagtacagaagaaacacaatgtccaggcttatggtgaagaagcaaaagcct 320
Query: 121 acgtgtgtatcatctacactttctaggtttgtgtgagtctgctctattatgccaaggcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 acgtgtgtatcatctacactttctaggtttgtgtgagtctgctctattatgccaatgcaa 380
Query: 181 ctactatcacctaaggatgcattcctcaggaggtgtcttctgtgtgccatgagactatat 240
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 ctacaatcacctaaggatgcattcctcaggaggtgtcttctgtgtgacatgagactatat 440
Query: 241 atatgatattttt----gtctattttgattgctatca 273
|||||| | ||||||||||||||||||||
Sbjct: 441 atatgaga-----agaagtctattttgattgctatca 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 672
Length adjustment: 9
Effective length of query: 264
Effective length of database: 663
Effective search space: 175032
Effective search space used: 175032
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no462_g10.g1 MSMg01no462_g10.g1 CHROMAT_FILE:
MSMg01no462_g10.g1 PHD_FILE: MSMg01no462_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:24 2005
(391 letters)
>mm_chr12_35392116_35392906
Length = 791
Score = 687 bits (355), Expect = 0.0
Identities = 382/391 (97%)
Strand = Plus / Minus
Query: 1 tacatcctgatcagcagacatcaggaagagagaatgagacactaggcttgaacatctgag 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tacatcctgatcagcaggcatcaggaagagagaatgagacactaggcttgaacatctgag 717
Query: 61 agcttaaagcccacccctagtgacatacctcctgcaacaaagccacacccacaccaatag 120
| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 716 accttaaagtccacccctagtgacatacctcgtgcaacaaagccacacccacaccaatag 657
Query: 121 ggtcacatctactgatagtgctaatccctgtaggtaggtggaggcccttcttattcaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ggtcacatctactgatagtgctaatccctgtaggtaggtggaggcccttcttattcaaac 597
Query: 181 catcatccatgtttttcttaaaataatttcttacctataatgcatttaaaatgcaaaagt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 596 catcatccatgtttttcttaaaataatttcttacctataatgcatttaaaatacaaaagt 537
Query: 241 ttttctgtgctcaatcctatccttaaggcagtgtttatgtgcccacagtgctacatagga 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 taatctgtgctcaatcctatccttaaggcagtgtttatgtgcccacagtgctacatagga 477
Query: 301 cattcacctgtgcatcctaccattggctgttgtcttaagcatcctataggaagtcatgat 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cattcacctgtgcatcctaccgttggctgttgtcttaagcatcctataggaagtcatgat 417
Query: 361 aaaaatggtaaatatgttagtatatttccat 391
|||||||||||||||||||||| ||||||||
Sbjct: 416 aaaaatggtaaatatgttagtaaatttccat 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
