Query= MSMg01no463_n18.b1 MSMg01no463_n18.b1 CHROMAT_FILE:
MSMg01no463_n18.b1 PHD_FILE: MSMg01no463_n18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:26 2005
(579 letters)
>mm_chr12_38129296_38130274
Length = 979
Score = 1056 bits (546), Expect = 0.0
Identities = 573/595 (96%), Gaps = 20/595 (3%)
Strand = Plus / Minus
Query: 5 gaattcatcaataatatcagcatcacctatgatctattccaaattaagtccacagtgttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 gaattcatcaataatatcagcatcacctatgatctattccaaattaagtccacagtgttc 854
Query: 65 ctgagccaaatctacactttacaaaaatggtcacttattcaccaggcgtgtaaaactctc 124
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 853 ctgagccaaatctacactttacaaaaatggtcacttattcaccaggcgtataaaactctc 794
Query: 125 tcctcgaaagatgaagcaggattatatatattttatttattcatattaaggggaaaatgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 tcctcgaaagatgaagcaggattatatatattttatttattcatattaaggggaaaatgt 734
Query: 185 accttaagcaaggaaaagggcactttgctgtaaattttctgatttggttttaatttaatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 accttaagcaaggaaaagggcactttgctgtaaattttctgatttggttttaatttaatt 674
Query: 245 taatttaatacatttgtcaagatccaaatgtatttattgtgtctcccgagagatataacc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 taatttaatacatttgtcaagatccaaatgtatttattgtgtctcccgagagatataacc 614
Query: 305 tgttctgagtatagcctggataaagatggaaggaatgccaggtagcagagaagtacaaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tgttctgagtatagcctggataaagatggaaggaatgccaggtagcagagaagtacaaga 554
Query: 365 tgatgaacagcagcattctccttttcaattgtggactttcagtataggaaggatagcaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tgatgaacagcagcattctccttttcaattgtggactttcagtataggaaggatagcaat 494
Query: 425 tgaccatagctggtatgtgaagccacagtaaaacgggg--------------------gt 464
|||||||||||||||||||||||||||||||||||||| ||
Sbjct: 493 tgaccatagctggtatgtgaagccacagtaaaacgggggtataatgaatgagttaagtgt 434
Query: 465 gcttgggtcttggattgctaggttaaattagcagttgataatagaaattggaattattta 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcttgggtcttggattgctaggttaaattagcagttgataatagaaattggaattattta 374
Query: 525 agtactctgagcctgtatttcctctgctagagnttagaaataaaagaaccgcgga 579
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 373 agtactctgagcctgtatttcctctgctagagtttagaaataaaagaaccgcgga 319
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_n18.g1 MSMg01no463_n18.g1 CHROMAT_FILE:
MSMg01no463_n18.g1 PHD_FILE: MSMg01no463_n18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:26 2005
(576 letters)
>mm_chr12_37939046_37940021
Length = 976
Score = 1093 bits (565), Expect = 0.0
Identities = 573/576 (99%)
Strand = Plus / Plus
Query: 1 tattaaattataaaaacaacatcttgggtggttctattatttttctgaagtcataaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattaaattataaaaacaacatcttgggtggttctattatttttctgaagtcataaatac 260
Query: 61 ataaagatttttcaaaatatcttccctagtagttcaaaattaagtaaaagaaagtcttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaagatttttcaaaatatcttccctagtagttcaaaattaagtaaaagaaagtcttgt 320
Query: 121 acagtcagcacactttatgtctatttcaagttgcacctcttccaacatcaggccctgagc 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 acagtcagcacactttatgtctatttcaagttgcaccccttccaacatcaggccctgagc 380
Query: 181 agcatcataagaatagggatagaaagaacagtataaaaattgaaaattacagattcctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcatcataagaatagggatagaaagaacagtataaaaattgaaaattacagattcctgc 440
Query: 241 tgatgtcttagttcattacataagagcaaaacacaatttcataaaaacacaggtcttact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatgtcttagttcattacataagagcaaaacacaatttcataaaaacacaggtcttact 500
Query: 301 agatatccatcatttcaagttcaagccaagataacctgacatcctttaaatccacattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agatatccatcatttcaagttcaagccaagataacctgacatcctttaaatccacattct 560
Query: 361 aggaagtaaattgtctaaaaatattctaataaaataggtaaagccagctccctctgtgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggaagtaaattgtctaaaaatattctaataaaataggtaaagccagctccctctgtgtc 620
Query: 421 ccactgaccatgatattacttaatgaagaatgacagagaaatatatctaaaagtagtgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccactgaccatgatattacttaatgaagaatgacagagaaatatatctaaaagtagtgag 680
Query: 481 aaataatttcattttaaaactctttatgtttactgtggagtcttanacagtttcctattt 540
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 681 aaataatttcattttaaaactcttcatgtttactgtggagtcttaaacagtttcctattt 740
Query: 541 catactaggctattcatagaatttagctatgttttc 576
||||||||||||||||||||||||||||||||||||
Sbjct: 741 catactaggctattcatagaatttagctatgttttc 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
