Query= MSMg01no464_o06.b1 MSMg01no464_o06.b1 CHROMAT_FILE:
MSMg01no464_o06.b1 PHD_FILE: MSMg01no464_o06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:48 2005
(150 letters)
>mm_chr12_47903604_47904153
Length = 550
Score = 238 bits (123), Expect = 1e-67
Identities = 144/153 (94%), Gaps = 6/153 (3%)
Strand = Plus / Minus
Query: 1 aattccactttt---atcagtctccttagttgggttttctctcacagttttttataaatt 57
|||||||||||| | ||||||| ||||||||||||||||||||| |||||| |||||
Sbjct: 350 aattccacttttaaaa--agtctccgtagttgggttttctctcacag-tttttaaaaatt 294
Query: 58 tggagcaaattccaataaaagaaagctgtataactatatcatggagtgtatgtgatacaa 117
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tggagcaaataccaataaaagaaagctgtataactatatcatggagtgtatgtgatacaa 234
Query: 118 ctgttttatgaccagtattagttttttcgatat 150
|||||||||||||||||||||||||||||||||
Sbjct: 233 ctgttttatgaccagtattagttttttcgatat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 150
Length of database: 550
Length adjustment: 8
Effective length of query: 142
Effective length of database: 542
Effective search space: 76964
Effective search space used: 76964
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_o06.g1 MSMg01no464_o06.g1 CHROMAT_FILE:
MSMg01no464_o06.g1 PHD_FILE: MSMg01no464_o06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:48 2005
(341 letters)
>mm_chr12_47800116_47800856
Length = 741
Score = 588 bits (304), Expect = e-172
Identities = 331/340 (97%)
Strand = Plus / Plus
Query: 1 cagcatgcagcattatttccattgtctagttcagatggagaacaggtgcttttattgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagcatgcagcattatttccattgtctagttcagatggagaacaggtgcttttattgatc 260
Query: 61 tgtaaacttaccaatgtaattttccacagttttaaccttttaaatattttacagtgcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtaaacttaccaatgtaattttccacagttttaaccttttaaatattttacagtgcttt 320
Query: 121 tatgcaactatattgctttttgatcatttttttttttaaacttatttttcaaaatattgt 180
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 321 tatgcaactatattgctttttgatcattttaaattgaaaacttatttttcaaaatattgt 380
Query: 181 ttcctacttctctgtgccctaagcaggaagtaatacatacatgacagtgctttggcctca 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 ttcctacttctctgtgccctaagcaggaagtaagacatacatgacagtgctttggcctca 440
Query: 241 ctccagtttaggtcactgaccccaccatactcaacctaacagtagttaatttagcgttat 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 441 ctccagtttaggtcactgaccccaccatactcaacctaacagtagttaatttagtgttat 500
Query: 301 ctagaactaacactcaaaactatacgcatatccctgtcta 340
|||||||||| ||| |||||||||||||||||||||||||
Sbjct: 501 ctagaactaatactgaaaactatacgcatatccctgtcta 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
