Query= MSMg01no469_e05.b1 MSMg01no469_e05.b1 CHROMAT_FILE:
MSMg01no469_e05.b1 PHD_FILE: MSMg01no469_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:47 2005
(604 letters)
>mm_chr12_101914907_101915911
Length = 1005
Score = 1123 bits (581), Expect = 0.0
Identities = 599/605 (99%), Gaps = 1/605 (0%)
Strand = Plus / Minus
Query: 1 agactctggccatctccatggaaggagaagcaaggccttagaggacagaccatttttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agactctggccatctccatggaaggagaagcaaggccttagaggacagaccatttttcct 746
Query: 61 tcccattaaagtttaacttcgaagtttaaggagcatctgcctttttagatttttcaggtc 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcccattaaagtttaatttcgaagtttaaggagcatctgcctttttagatttttcaggtc 686
Query: 121 tgataggaggttgctaccactaccagcattccagcagaagagaaatctgggcttctgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgataggaggttgctaccactaccagcattccagcagaagagaaatctgggcttctgtct 626
Query: 181 ctacccttgcttacatcacatatgtttgtagtcacatgaacaaatttccttacggtaatt 240
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 625 ctacccttgcttacatcacatatgtttgtattcacatgaacaaattaccttacggtaatt 566
Query: 241 cagtattgagtttttgtgccttgggtcctgtcatacaaaggtttgttttatagctatctg 300
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagtagtgagcttttgtgccttgggtcctgtcatacaaaggtttgttttatagctatctg 506
Query: 301 tagttatttagcatacagtgtagagccaccttttataagtaccaacgcacaagcctgatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagttatttagcatacagtgtagagccaccttttataagtaccaacgcacaagcctgatg 446
Query: 361 gatattcttaccagctaaggctatgatccctgaaaggcatcaccatcttagtgttaaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatattcttaccagctaaggctatgatccctgaaaggcatcaccatcttagtgttaaatc 386
Query: 421 agatgctcaacttgtgcattctccagtgcccactcatctctggatcattgataggtatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agatgctcaacttgtgcattctccagtgcccactcatctctggatcattgataggtatat 326
Query: 481 attcttcaggaacaaagttaggcccaccttacctaattcacaaggtagaatgc-tttgaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 325 attcttcaggaacaaagttaggcccaccttacctaattcacaaggtagaatgcttttgaa 266
Query: 540 atatcaaagtaatgttggctagtcctacctttgttttctgtttcaaaggtagtacctatc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atatcaaagtaatgttggctagtcctacctttgttttctgtttcaaaggtagtacctatc 206
Query: 600 tactc 604
|||||
Sbjct: 205 tactc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1005
Length adjustment: 10
Effective length of query: 594
Effective length of database: 995
Effective search space: 591030
Effective search space used: 591030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_e05.g1 MSMg01no469_e05.g1 CHROMAT_FILE:
MSMg01no469_e05.g1 PHD_FILE: MSMg01no469_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:47 2005
(558 letters)
>mm_chr12_101782589_101783546
Length = 958
Score = 1071 bits (554), Expect = 0.0
Identities = 557/558 (99%)
Strand = Plus / Plus
Query: 1 actagggacttgggtatatggaagaatcaacgagtattttagaccttgacataatataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actagggacttgggtatatggaagaatcaacgagtattttagaccttgacataatataga 260
Query: 61 aaattaaatttcaagttcaatagacataggagaagagagacccagtgaactagaagacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattaaatttcaagttcaatagacataggagaagagagacccagtgaactagaagacag 320
Query: 121 gttggtaaaaataggtttaaccacaggggaagaggatggaaaaaatggggagataatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttggtaaaaataggtttaaccacaggggaagaggatggaaaaaatggggagataatttg 380
Query: 181 taacatgtctcaactttctccctcccatctagctagagaaaagaaagatactttctcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taacatgtctcaactttctccctcccatctagctagagaaaagaaagatactttctcttt 440
Query: 241 gaaataagacttagaactgactttgccacagattttaaggaatgtaacagtattttaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaataagacttagaactgactttgccacagattttaaggaatgtaacagtattttaaaa 500
Query: 301 gtggcaaacctaggactgcatattcagcagtacacttcaaaaataaaggcaacactgaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtggcaaacctaggactgcatattcagcagtacacttcaaaaataaaggcaacactgaac 560
Query: 361 tgtgcatttttagtgtttgattcctactgttaatacattgtatcccaacaaaggtgttag 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgcatttttagtgtttgattcctgctgttaatacattgtatcccaacaaaggtgttag 620
Query: 421 gaaaaataaaagcaaaatatttagaaaaacaaaaaccaagagaacatagcgaaggcaggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaaaataaaagcaaaatatttagaaaaacaaaaaccaagagaacatagcgaaggcaggt 680
Query: 481 ctggcattaaaagaagcactgtgtcatataatgaagtttttaaagtcaaggacagaccac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctggcattaaaagaagcactgtgtcatataatgaagtttttaaagtcaaggacagaccac 740
Query: 541 atatgacaatgatcctgt 558
||||||||||||||||||
Sbjct: 741 atatgacaatgatcctgt 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
