Query= MSMg01no469_j14.b1 MSMg01no469_j14.b1 CHROMAT_FILE:
MSMg01no469_j14.b1 PHD_FILE: MSMg01no469_j14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:14 2005
(517 letters)
>mm_chr12_26813425_26814341
Length = 917
Score = 619 bits (320), Expect = 0.0
Identities = 332/336 (98%), Gaps = 2/336 (0%)
Strand = Plus / Minus
Query: 183 tggccaggtcctggtttcctctccattccttagcctggcctctttggctcccacagtgt- 241
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 tggccaggtcctggtttcctctccattccttagcctggcctctttggctcccacagtgtc 858
Query: 242 ttttcttactgttcttatgatgataacattcttattctatcagaacccacccactgaaac 301
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 ctatc-tactgttcttatgatgataacattcttattctatcagaacccacccactgaaac 799
Query: 302 ccagttacatccctaaaggccttgtctccaaatttagttgcatcttaacattctgagata 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ccagttacatccctaaaggccttgtctccaaatttagttgcatcttaacattctgagata 739
Query: 362 cggctccaatgtatagatttttttttttaatgtgggaaggacagttcaatccaaaataga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cggctccaatgtatagatttttttttttaatgtgggaaggacagttcaatccaaaataga 679
Query: 422 tagttgagaaaacataattctaaattagacaacctatggcctcaagttgttcagatctac 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tagttgagaaaacataattctaaattagacaacctatggcctcaagttgttcagatctac 619
Query: 482 tttagcaataaatcctgtaacttgtttatccattag 517
||||||||||||||||||||||||||||||||||||
Sbjct: 618 tttagcaataaatcctgtaacttgtttatccattag 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_j14.g1 MSMg01no469_j14.g1 CHROMAT_FILE:
MSMg01no469_j14.g1 PHD_FILE: MSMg01no469_j14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:14 2005
(469 letters)
>mm_chr12_26640463_26641330
Length = 868
Score = 876 bits (453), Expect = 0.0
Identities = 465/469 (99%), Gaps = 1/469 (0%)
Strand = Plus / Plus
Query: 1 aagctattttcacacagtgtttgggatccttgatgatccagctcatcaatctctgttaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagctattttcacacagtgtttgggatccttgatgatccagctcatcaatctctgttaga 260
Query: 61 aatccagatatgggccatcagcatatcctgcctgctctgtgtcatggatctcatccctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatccagatatgggccatcagcatatcctgcctgctctgtgtcatggatctcatccctac 320
Query: 121 atcccaagccctccttggcacctctttaccatggtgctagggtttaagcattcattaggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcccaagccctccttggcacctctttaccatggtgctagggtttaagcattcattaggg 380
Query: 181 acacagtgtacctaggccatcactggcaattgacacagttgacaaagaaatagaatattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacagtgtacctaggccatcactggcaattgacacagttgacaaagaaatagaatattt 440
Query: 241 attaatatcccggggcagccccagacgaccccttcagcaacagatcccagatctcagaat 300
| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ag-aacatcccggggcagccccagacgaccccttcagcaacagatcccagatctcagaat 499
Query: 301 tatctcttcttggtgaaactgtagttctgagtaccctatgtattctggacaccacaaagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tatctcttcttggtgaaactgtagttctgagtaccctatgtattctggacaccacaaagg 559
Query: 361 gagggagaaccttgttcttctgcttcataagcatagggaatctaatcagacaggacacag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gagggagaaccttgttcttctgcttcataagcatagggaatctaatcagacaggacacag 619
Query: 421 agcacctacacatagagaggggctcaaagatcagaccagttttgaccag 469
|||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 620 agcacctacacatagagaggggctcaaagatcagacaagttttgaccag 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 868
Length adjustment: 10
Effective length of query: 459
Effective length of database: 858
Effective search space: 393822
Effective search space used: 393822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
