CCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGCAGCGCGG
AATTCCTAGTGCTTTCTGTGTGGGATGTCCGCATCTTAATGCTGTCCAAA
TAAAAGAAGGAAGGAGGAGGACACTTGGGGAAAACCACTCACTCACATTT
TCAAGTAACATCTCTTTTTCTAAAGGAATCGAATTCATATATTAACAATT
CAGAGACAGATAATCAAACAAAGGTTAAAAAAACAGCGGCCCCCCAGTCT
TACAGGAGAGCGTGGTTTAGGCTGTGGGTGCCAAGGAATTGAGTGTTTTC
TTTCATATCTCCACTTCACATGATTCGATGCAATAACCTTTGCTCGGTGC
AGATATTAAAACCCCGTGCTTTGAACATGTTTTTGTACAACTGAGTAAAC
AAAAGAATATTATTGATTATGCTCCCCAGAGGAAAAGCTTAATATCTCTT
CATCACTAGGGCTGTAGGGATGTGTGACTGAAAAGATTGTCGCAAGTTTC
CAACTGAGCAGAATTGCTACAAGTCTTTCTGCAAGGGTTCCTGGAGACTA
GAGCAAGACACTGGGTAAGGTGTTGCCAGAAGCCACAGCTGGGTCACCAG
AAGACAACAGAATTTTTTTTTCTGTCAGTTTGTGCTTGTGGGGCGGGATG
CTATCAATGGCTTGTTGACATGCTCCTGTCTGCCATCTTGGTTCTCAACC
TGTCTTAAGAGTTAGCAGGAGTCAATAGGAGGTTCTATTTGTGGATAAGA
AGCAAGGGGTGAA

CAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGATTTGCCCAGAGTCAGTTCCTT
GGACACTTTTAAAAGAGTTTCATGAAATGACCCCAGAAGTTCTCNNGCCA
GNTGGNTGTGTTCCAAAAAGGGGGGTTCCCCCAANAGGAAAAAACCTTTT
ATAATTTTTTTTTTTTTCCCCCCCCTCTTTCTTTTTTTTTTTCTTTCGTC
ACNCNTAGANNGCCCCCCGCCGCCACAACCGCCCCCCCAAGAAATACATC
CTTTTTTTCCTTTCTTTTTTTTTTTTTTTCTCCCTTCCCTTCCTCTCTTT
CTCTCTTTTTTTTTTCCCTCTTTTTTTTCTTCCACTTTTCTTTCTTTTTT
TTTTTTCTTTTTTCCTTTTCTCCCCCCAATTGTTCGTTATTCCTCTTTTT
GTTTTTTGTCNCCTTTTCTTTCTCTCCCCCTTCCTTCTCCCTTTTTCCTC
CTCCTTTCTTTTTTTATCTTCTATTATTTCCTCCACCCCTCTCCACCCAC
TGTTCGCCTTCTCTTTTTGTTTTTTTTTTTCTCTCCTTTTCTCCCCCCCC
TCCCGTTCTCCCCCTCCTCTCTTCTGTTAACCATTTTTTTCTTATTTATT
CTCTCCTCTTACTCACTTTCCTTTATTTTTTTCTTTTTTTTCCTTTCTCC
TCCCCTCTTTTTTTCTTATTCCTTTTTTTCCTCCCCCTCTTCCCTCTATT
CATTATTTACCTATTCTTCAATTTTTTCATCCACCTTTCTCTCCTCGCCC
TTCTTCCTTTTTTTTTCN

Query= MSMg01no471_p24.b1 MSMg01no471_p24.b1 CHROMAT_FILE:
MSMg01no471_p24.b1 PHD_FILE: MSMg01no471_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:28 2005
         (625 letters)



>mm_chr12_108497812_108498837
          Length = 1026

 Score = 1156 bits (598), Expect = 0.0
 Identities = 619/626 (98%), Gaps = 1/626 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtgggatgtccgcatcttaatgctgtccaaataaaagaaggaaggaggaggacacttgg 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 826 tgtgggatgtccgcatcttaatgccgtccaaataaaagaaggaaggaggaggacacttgg 767

                                                                       
Query: 61  ggaaaaccactcactcacattttcaagtaacatctctttttctaaaggaatcgaattcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 766 ggaaaaccactcactcacattttcaagtaacatctctttttctaaaggaattgaattcat 707

                                                                       
Query: 121 atattaacaattcagagacagataatcaaacaaaggttaaaaaaacagcggccccccagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 atattaacaattcagagacagataatcaaacaaaggttaaaaaaacagcggccccccagt 647

                                                                       
Query: 181 cttacaggagagcgtggtttaggctgtgggtgccaaggaattgagtgttttctttcatat 240
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 cttacaggagaacgtggtttaggctgtgggtgccaaggaattgagtgttttctttcatat 587

                                                                       
Query: 241 ctccacttcacatgattcgatgcaataacctttgctcggtgcagatattaaaaccccgtg 300
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctccacttcacatgatacgatgcaataacctttgctcggtgcagatattaaaaccccgtg 527

                                                                       
Query: 301 ctttgaacatgtttttgtacaactgagtaaacaaaagaatattattgattatgctcccca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ctttgaacatgtttttgtacaactgagtaaacaaaagaatattattgattatgctcccca 467

                                                                       
Query: 361 gaggaaaagcttaatatctcttcatcactagggctgtagggatgtgtgactgaaaagatt 420
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 466 gaggaaaagcttaatatctcttcatcactaaggctgtagggatgtgtgactgaaaagatt 407

                                                                       
Query: 421 gtcgcaagtttccaactgagcagaattgctacaagtctttctgcaagggttcctggagac 480
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gtcgcaagtctccaactgagcagaattgctacaagtctttctgcaagggttcctggagac 347

                                                                       
Query: 481 tagagcaagacactgggtaaggtgttgccagaagccacagctgggtcaccagaagacaac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 tagagcaagacactgggtaaggtgttgccagaagccacagctgggtcaccagaagacaac 287

                                                                       
Query: 541 agaa-tttttttttctgtcagtttgtgcttgtggggcgggatgctatcaatggcttgttg 599
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agaattttttttttctgtcagtttgtgcttgtggggcgggatgctatcaatggcttgttg 227

                                     
Query: 600 acatgctcctgtctgccatcttggtt 625
           ||||||||||||||||||||||||||
Sbjct: 226 acatgctcctgtctgccatcttggtt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1026
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1016
Effective search space:   624840
Effective search space used:   624840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)