Query= MSMg01no475_c14.b1 MSMg01no475_c14.b1 CHROMAT_FILE:
MSMg01no475_c14.b1 PHD_FILE: MSMg01no475_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:50 2005
(609 letters)
>mm_chr12_53237905_53238913
Length = 1009
Score = 1104 bits (571), Expect = 0.0
Identities = 597/607 (98%), Gaps = 4/607 (0%)
Strand = Plus / Plus
Query: 5 gaattctagacca--tttccgactacatattaagatcctgtcacaaacagaaaaccaacc 62
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagaccagcttg--gactacatattaagatcctgtcacaaacagaaaaccaacc 262
Query: 63 atacatacatttaaagagaatctctacaaagaaacttttgatatccttgagttactatta 122
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atacatacatttaaagagaacctctacaaagaaacttttgatatccttgagttactatta 322
Query: 123 ccgtgatcctgttggctccgtggcttagatcttacagtagtcctttctctcttttcctgc 182
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctgtgatcctgttggctccatggcttagatcttacagtagtcctttctctcttttcctgc 382
Query: 183 actatgtgcatttctgcctttcacactctgttcatcctacaccctagactagagttttat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 actatgtgcatttctgcctttcacactctgttcatcctacaccctagactagagttttat 442
Query: 243 gtaagtactttggataccctcaactgattactattatatcaggattcatgggattgaaca 302
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 443 gtaagtactttggataccctcaactgattactagtatatcaggattcatgggattgaaca 502
Query: 303 ggggatctccaagagtgcctattgttttatatgctgtgtgaacagtagcaaagaaaacat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggggatctccaagagtgcctattgttttatatgctgtgtgaacagtagcaaagaaaacat 562
Query: 363 acaaaatcactcacttttattgtgagttttatttattctcttggaagaaatgcaataacc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 acaaaatcactcacttttattgtgagttttatttattctcttggaagaaatgcaataacc 622
Query: 423 aagtaaaggtgtagtgttgactatttatacgttactaagaaccaagaaaactgtgaaagg 482
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 623 aagtaaaggtgtagtgttgactatttatacattactaagaaccaagaaaactgtgaaagg 682
Query: 483 gaatagggaaagccaagtgtattatgggtattatgattttagggtggtcagtgaaagtca 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gaatagggaaagccaagtgtattatgggtattatgattttagggtggtcagtgaaagtca 742
Query: 543 tgattaatgcatgaagtaagctagcagagatgaggttgagggctggatggtagaggaatg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tgattaatgcatgaagtaagctagcagagatgaggttgagggctggatggtagaggaatg 802
Query: 603 aggtgca 609
|||||||
Sbjct: 803 aggtgca 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_c14.g1 MSMg01no475_c14.g1 CHROMAT_FILE:
MSMg01no475_c14.g1 PHD_FILE: MSMg01no475_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:51 2005
(173 letters)
>mm_chr12_53410701_53411270
Length = 570
Score = 253 bits (131), Expect = 3e-72
Identities = 142/147 (96%), Gaps = 3/147 (2%)
Strand = Plus / Minus
Query: 1 tcttaaacaaatgcaatagtcaccaccaagcttacccataaattatgaaaccattctttt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 310 tcttaaacaaatgcaatagtcaccaccaagcttacccaaaaattatgaaacca---tttt 254
Query: 61 tttttttttttttttgaggcagggtttcaccatggactctatactaaccctacatttatt 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 253 tttttttttttttttgaggcagggtttcaccatgtactctatactaaccctacatttatt 194
Query: 121 tatttatttatttatttatttatttat 147
|||||||||||||||||||||||||||
Sbjct: 193 tatttatttatttatttatttatttat 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 12
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 570
Length adjustment: 8
Effective length of query: 165
Effective length of database: 562
Effective search space: 92730
Effective search space used: 92730
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
