Query= MSMg01no476_h02.b1 MSMg01no476_h02.b1 CHROMAT_FILE:
MSMg01no476_h02.b1 PHD_FILE: MSMg01no476_h02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:33 2005
(549 letters)
>mm_chr12_33334684_33335631
Length = 948
Score = 936 bits (484), Expect = 0.0
Identities = 529/546 (96%), Gaps = 6/546 (1%)
Strand = Plus / Plus
Query: 5 gaattctccttc-tatcctaggagtcctgaggcccctcgggtcagggttcagtctctgtg 63
|||||||||||| ||||||| | | |||||||| ||||||||||||||||||||||
Sbjct: 208 gaattctccttcaaatcctagaaat----aggcccctagggtcagggttcagtctctgtg 263
Query: 64 tatcttgttggggcttccaaaatattaccgggaagtcacaagaaaggaccactcacatac 123
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 264 tatcttgctggggcttccaaaatattactgggaagtcacaagaaaggaccactcacatac 323
Query: 124 atatttaaagccaattgaatgtctttattccatctagatgggtctatgctcaggaattct 183
| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 324 a-atttaaagccaattgaatctctttattccatctggatgggtctatgctcaggaattct 382
Query: 184 atacctaagtgtagcaacaagtgtctagagaatggggtttttgaaggcagaaactcatcc 243
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atatctaagtgtagcaacaagtgtctagagaatggggtttttgaaggcagaaactcatcc 442
Query: 244 tagcatctgtctcagcagctgctgggagagtttaatgtatacaagtagttttatagaggc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tagcatctgtctcagcagctgctgggagagtttaatgtatacaagtagttttatagaggc 502
Query: 304 taagataagcagttagcaggcagattaacagaacctaaaatagctggggtatcttgatga 363
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 503 taagataagcagttagcaggcagattaacagaacctaaaatagctggtgtatcttgatga 562
Query: 364 tgtctatctagaatagagttggataattttctatgaaattctccatcaagaagatcaaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tgtctatctagaatagagttggataattttctatgaaattctccatcaagaagatcaaat 622
Query: 424 tctagttaaacctgaagtagcctcagcaagaatacaagatgagggggatgtctctgcact 483
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tctagttaaacttgaagtagcctcagcaagaatacaagatgagggggatgtctctgcact 682
Query: 484 gtcttgccctgtcatactatcaacttctgtgcctttggctaaactatacaaaatctgagc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtcttgccctgtcatactatcaacttctgtgcctttggctaaactatacaaaatctgagc 742
Query: 544 cttata 549
||||||
Sbjct: 743 cttata 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 948
Length adjustment: 10
Effective length of query: 539
Effective length of database: 938
Effective search space: 505582
Effective search space used: 505582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_h02.g1 MSMg01no476_h02.g1 CHROMAT_FILE:
MSMg01no476_h02.g1 PHD_FILE: MSMg01no476_h02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:33 2005
(176 letters)
>mm_chr12_33376855_33377430
Length = 576
Score = 310 bits (160), Expect = 4e-89
Identities = 172/176 (97%)
Strand = Plus / Minus
Query: 1 accttgcagcttcctgggccttgtactaaacatgcctgtgggcatccatctggttaatct 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 accttgcagcttcccgggccttgtactaaacatgcctgtgggcatccatctggttaatct 317
Query: 61 ggctcctggtgggggggaggggggagacgacatctctccctctctttggctcagttgcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggctcctggtgggggggaggggggagacgacatctctccctctctttggctcagttgcta 257
Query: 121 cacattttcctccctgccttccaagaaggacttgctgcatgtgcgcccacgcctgg 176
|||||||||||||||||||||||||||||||||| || ||||||| ||||||||||
Sbjct: 256 cacattttcctccctgccttccaagaaggacttggtgtatgtgcgtccacgcctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 176
Length of database: 576
Length adjustment: 8
Effective length of query: 168
Effective length of database: 568
Effective search space: 95424
Effective search space used: 95424
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
