CGTGTTCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCAAATGTTTGATACTGAATGGCTGAGAAGCACCTGAAA
AAACGTTCAAAATTTTTAATCATCAGGGAAATGCACATCAAAACAACCCT
GAGTTTCTACCTCACACCTGTCAGAATGGTTAAGATAAAAAACTCAGGTG
ACAGCAAATGCTTGCAAGGATGTGAAGAAAGAGGAACACTCCTCTATTGC
TGGTGGGATTGCAGCTGGTACAACCACTCTGGAAATCAGTCTGGCAGTTC
CTCAGTAAATTGGACATAGTACTACCAGAAGATCCAGCAATACCTGATCT
GGGCATATACCCAGAAGATGTTCCAACTGGTAATAAAAACACATGCTCCA
CTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCC
AGATGTCCCACAGCATAGGAATGGATACAGAAAATGTGATACATTTACAC
AATGGAATACTACTCAGTTATTAAAAACATTGAATTTCATATTGTTGTTC
CACCTATATGGTTGTAGACCCCTTCAGACCCTTCGGCTCCTTGGGTGCTT
TTCTCTAGCTTCACCCATTGGGGTGTCCTTTTGTTCTATCCTATTAAATA
ATTGTGAGCTATTCCCTTGTTTGTAAATAGCGCTTTTTCTTGGCCCTTAT
CCTCCTTATGGTATAATCTCATTTATCCGAGGGAGTTTCCTTTT

AAAACACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTGCCACAAGGAATTCCAGACCGGCCCCAGCTAC
ATGGTGAGACTCTGCTTCAAAACAAAAACAGACAAACAAACAAAAACAAA
CAAAAAACAAAAACAAAACAAACAAAAAACCCATTTCCTATGAAAAACGT
GTCTTGAAAAAACTTCATGTAAATGTAACTAATAAAGAATTCTTTAATAC
TTAACCCCATTTAAATTTAAACAACCTTTTTTGTCTTAACTATGTAACAG
ACAGGCTTTGTCCTAATCACAGGTTCTATGTGTGTGTGATGTTTGATGAC
TATTACCAAGTTGATTAATTTGGAAGTAGTTTTGATGGCTAAGGCATATT
CTAGGTCTATCTTTGAGGAAATTTCCATAGATAATGAACAAAAGAGAGGA
GGCAGCTCTGCTGATAGGTAGCTGCATCCTACAGGCTGAAAGCCTGGATA
GAGGGAGAAAGCTTGTATTAACAGGCATTCTCTCTTTGTTTCTTGCCCTC
TGGGATTTGAGCTGACATACCACAAATACATCATACCACATGTACCATCA
TACATGACATACCACAAATACATCAGCCATGGTGGACTGAAACCCCTGAC
ATCCTTAGCCAGAATAAATAGATCATCTTTTAAAATCATTCCTGTTGGAT
CCTCACTTTCAGTGCTAAAAACGCTAACAGGCAGTCAGAGCCN

Query= MSMg01no477_g02.g1 MSMg01no477_g02.g1 CHROMAT_FILE:
MSMg01no477_g02.g1 PHD_FILE: MSMg01no477_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:48 2005
         (409 letters)



>mm_chr12_67040257_67041065
          Length = 809

 Score =  609 bits (315), Expect = e-179
 Identities = 365/409 (89%), Gaps = 42/409 (10%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtgtgtgatgtttgatgactattaccaagttgattaatttggaagtagttttgatggct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgtgtgatgtttgatgactattaccaagttgattaatttggaagtagttttgatggct 260

                                                                       
Query: 61  aaggcatattctaggtctatctttgaggaaatttccatagataatgaacaaaagagagga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggcatattctaggtctatctttgaggaaatttccatagataatgaacaaaagagagga 320

                                                                       
Query: 121 ggcagctctgctgataggtagctgcatcctacaggctgaaagcctggatagagggagaaa 180
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcagctatgctgataggtagctgcatcctacaggctgaaagcctggatagagggagaaa 380

                                                                       
Query: 181 gcttgtattaacaggcattctctctttgtttcttgccctctgggatttgagctgacatac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttgtattaacaggcattctctctttgtttcttgccctctgggatttgagctgacatac 440

                                                                       
Query: 241 cacaaatacatcataccacatgtaccatcatacatgacataccacaaatacatcagccat 300
           |||||||||||||                                          |||||
Sbjct: 441 cacaaatacatca------------------------------------------gccat 458

                                                                       
Query: 301 ggtggactgaaacccctgacatccttagccagaataaatagatcatcttttaaaatcatt 360
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 459 ggtggactgaaacccctgacatccttagccaaaataaatagatcatcttttaaaatcatt 518

                                                            
Query: 361 cctgttggatcctcactttcagtgctaaaaacgctaacaggcagtcaga 409
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cctgttggatcctcactttcagtgctaaaaacgctaacaggcagtcaga 567


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space:   320000
Effective search space used:   320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)