Query= MSMg01no477_o23.b1 MSMg01no477_o23.b1 CHROMAT_FILE:
MSMg01no477_o23.b1 PHD_FILE: MSMg01no477_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:31 2005
(706 letters)
>mm_chr12_27963011_27964116
Length = 1106
Score = 1255 bits (649), Expect = 0.0
Identities = 649/649 (100%)
Strand = Plus / Minus
Query: 58 agtaatagtttaacatttttaatgatctaaaatatcttaaagtgtgctaaatggttcaag 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 agtaatagtttaacatttttaatgatctaaaatatcttaaagtgtgctaaatggttcaag 1047
Query: 118 aactaaaggaagggaaatatttcattaaaggaagaagacattatgataaaaagtgaggaa 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 aactaaaggaagggaaatatttcattaaaggaagaagacattatgataaaaagtgaggaa 987
Query: 178 ctagaaaacaatgaaacagaatattttaagaataagaaagaatttttgaaatgaatttga 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 ctagaaaacaatgaaacagaatattttaagaataagaaagaatttttgaaatgaatttga 927
Query: 238 aattagaaccctcaaaggatgaaataaatactagactaaacacagctggagagagattta 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 aattagaaccctcaaaggatgaaataaatactagactaaacacagctggagagagattta 867
Query: 298 atgagctggaagatagagctaagggaagcaaaagaaaggagcactcagagaaggagatat 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 atgagctggaagatagagctaagggaagcaaaagaaaggagcactcagagaaggagatat 807
Query: 358 gagcatatgatgagagctatgggggaagcaaagaagtcttgtaatagaaaacatagtgat 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gagcatatgatgagagctatgggggaagcaaagaagtcttgtaatagaaaacatagtgat 747
Query: 418 tattaaagggaccatgttaatctacataaaggtttagaagtttccttaatggactgaagg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tattaaagggaccatgttaatctacataaaggtttagaagtttccttaatggactgaagg 687
Query: 478 ttcctcagtccagaaagttaatttgtattcccaataagataaataaaaacagaaatgaat 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ttcctcagtccagaaagttaatttgtattcccaataagataaataaaaacagaaatgaat 627
Query: 538 tcacagataaaaatatgataatcagatgagacaggttgccatctgttttagtttgggttt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tcacagataaaaatatgataatcagatgagacaggttgccatctgttttagtttgggttt 567
Query: 598 tattacaggcaccatgcatgatccaggcaactcctctaaaggaaaacatttcattgaggc 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tattacaggcaccatgcatgatccaggcaactcctctaaaggaaaacatttcattgaggc 507
Query: 658 tggcttacaggttcagaggttcagttcatctatcatcaagattggaagc 706
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tggcttacaggttcagaggttcagttcatctatcatcaagattggaagc 458
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1106
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1096
Effective search space: 762816
Effective search space used: 762816
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no477_o23.g1 MSMg01no477_o23.g1 CHROMAT_FILE:
MSMg01no477_o23.g1 PHD_FILE: MSMg01no477_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:31 2005
(548 letters)
>mm_chr12_27745942_27746889
Length = 948
Score = 1046 bits (541), Expect = 0.0
Identities = 547/549 (99%), Gaps = 2/549 (0%)
Strand = Plus / Plus
Query: 1 ttctctgggtccttgatggagtctcgtccttgatgaagcccgggtgacattcgactagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctctgggtccttgatggagtctcgtccttgatgaagcccgggtgacattcgactagca 260
Query: 61 acggggctggggagatctgcaaagaattatgattgggctcccgtccagctgcagatgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acggggctggggagatctgcaaagaattatgattgggctcccgtccagctgcagatgttt 320
Query: 121 ccatgggaagagcacatggaagggtctggccaagcaatcagagcatctaaattcaatctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatgggaagagcacatggaagggtctggccaagcaatcagagcatctaaattcaatctg 380
Query: 181 agactgggtgcctccttcttccagatcagagcctggcatgtttatgcaggagccagcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agactgggtgcctccttcttccagatcagagcctggcatgtttatgcaggagccagcata 440
Query: 241 gtctttctcctgcctactttctgcttaggaagaatttgcccgcagttgggagtgcagtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtctttctcctgcctactttctgcttaggaagaatttgcccgcagttgggagtgcagtgg 500
Query: 301 ctctggttgccacgggaactcggcctctcctttattcaccatggcagggcatatagagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctctggttgccacgggaactcggcctctcctttattcaccatggcagggcatatagagag 560
Query: 361 agccaacaagcataaatcgtattaagcgatgcacggggttatccaccatggatgtaggca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agccaacaagcataaatcgtattaagcgatgcacggggttatccaccatggatgtaggca 620
Query: 421 acatcacagaatttactactggaccctatacttggtgtgcagagaaaatgcaggctacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acatcacagaatttactactggaccctatacttggtgtgcagagaaaatgcaggctacaa 680
Query: 481 attccttggagctgtctactcattagagctaggaatcgtgctgttgacttttctaaatcg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 attccttggagctgtctactcattagagctaggaatcgtgctgttgacttttctaa-tcg 739
Query: 541 ca-gcagag 548
|| ||||||
Sbjct: 740 caagcagag 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
