Query= MSMg01no478_k14.b1 MSMg01no478_k14.b1 CHROMAT_FILE:
MSMg01no478_k14.b1 PHD_FILE: MSMg01no478_k14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:25 2005
(324 letters)
>mm_chr12_37745486_37746209
Length = 724
Score = 627 bits (324), Expect = 0.0
Identities = 324/324 (100%)
Strand = Plus / Minus
Query: 1 tgtagtagatttagatatgagagatcaaacacaggctaactaaaacttcaaagaatcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tgtagtagatttagatatgagagatcaaacacaggctaactaaaacttcaaagaatcttg 603
Query: 61 aaatgggaagtgtgtagggtgacttcatcaagtaagcatattcctgggaatttagaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aaatgggaagtgtgtagggtgacttcatcaagtaagcatattcctgggaatttagaaagc 543
Query: 121 tgtgttcatatctaggacactaatattttcctctttactcatttctgtccaggaagtaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgtgttcatatctaggacactaatattttcctctttactcatttctgtccaggaagtaag 483
Query: 181 gacaaaagtagagctataaaatgccagccaattcattaagggcttgacccagtagtataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gacaaaagtagagctataaaatgccagccaattcattaagggcttgacccagtagtataa 423
Query: 241 cctctaagagagacacacacagatatataataatcaagcagtcagaagagggactatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cctctaagagagacacacacagatatataataatcaagcagtcagaagagggactatgaa 363
Query: 301 agccacatgaggaaaatgaatcat 324
||||||||||||||||||||||||
Sbjct: 362 agccacatgaggaaaatgaatcat 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_k14.g1 MSMg01no478_k14.g1 CHROMAT_FILE:
MSMg01no478_k14.g1 PHD_FILE: MSMg01no478_k14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:26 2005
(637 letters)
>mm_chr12_37602982_37604014
Length = 1033
Score = 1178 bits (609), Expect = 0.0
Identities = 629/637 (98%), Gaps = 4/637 (0%)
Strand = Plus / Plus
Query: 1 atacatcaggagcatactgtgagaaaagctagaggtgaaagcatgtagaatcattcctga 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 atacatcaggagcatactgtgagaaaagctagaggtgaaagcatctagaatcattcctga 260
Query: 61 taaactgatatgaggtctaatgcagtagtgcttctagtttatcaaaagccagcagaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaactgatatgaggtctaatgcagtagtgcttctagtttatcaaaagccagcagaatat 320
Query: 121 tctccatcgtcatctgtactgcagggaagataggaaattaaatgatacaatgcactaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctccatcgtcatctgtactgcagggaagataggaaattaaatgatacaatgcactaagt 380
Query: 181 tatactgagagaaattactattgggttatgatagtaatgctataacctatgtgataaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatactgagagaaattactattgggttatgatagtaatgctataacctatgtgataaata 440
Query: 241 tattctgtatattactatatgaaagaataaagagaaattataatttcaaattttacgaag 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattctttatattactatatgaaagaataaagagaaattataatttcaaattttacgaag 500
Query: 301 attaaaatttaaaactttacaaaaacattaaacaaaagatacagttttcaattgtaagca 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 attaaaatttaaaactttacaaaaaca---aacaaaagatacagttttcaattgtaagca 557
Query: 361 taattgagtagattattgttcttccatgaaagaacatatagaaaatgttatattgtgatt 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 558 taattgagtagattattgttcttccatgaaaggacatatagaaaatgttatattgtgatt 617
Query: 421 tggatataaaatgttccctaaatgttcctgtgtagagagacatgatttccatcttgtgga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tggatataaaatgttccctaaatgttcctgtgtagagagacatgatttccatcttgtgga 677
Query: 481 ggactcatacgtaatcaatggattcatccactgacatttagtaatctgatggaattagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ggactcatacgtaatcaatggattcatccactgacatttagtaatctgatggaattagta 737
Query: 541 ggaaatggttgcagaaagatggtgatgggacgtgttttggaaaggtcttctcatgtgggc 600
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ggaaatggttgcagaaagttggtgatgggacgtgttttggaaaggtcttctcatgtgggc 797
Query: 601 cctctatattattctgttttttttggtagctctcatg 637
||||||||||||||| |||||||||||||||||||||
Sbjct: 798 cctctatattattct-ttttttttggtagctctcatg 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1033
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1023
Effective search space: 641421
Effective search space used: 641421
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
