Query= MSMg01no481_h22.b1 MSMg01no481_h22.b1 CHROMAT_FILE:
MSMg01no481_h22.b1 PHD_FILE: MSMg01no481_h22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:09 2005
(622 letters)
>mm_chr12_59332513_59333534
Length = 1022
Score = 1116 bits (577), Expect = 0.0
Identities = 609/621 (98%), Gaps = 5/621 (0%)
Strand = Plus / Plus
Query: 5 gaattcatgaaattctgtgggaaataaatggaactagaatatatcctgagtgaggtaacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcatgaaattctgtgggaaataaatggaactagaatatatcctgagtgaggtaacc 263
Query: 65 caatcacaaaagaacacacatggtatgcattcactggtaagtgagcccagaagctcagaa 124
||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||
Sbjct: 264 caatcacaaaagaacacacatggtatgcactcactgataagtgaacccagaagctcagaa 323
Query: 125 tactctatttcctttctttgcatccctttgattctgctagatcccagtagtcagggaaca 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 324 tactctatttcctttctttgcatccctttgattctgctagatcccagtagtcggggaaca 383
Query: 185 attattttgcatcaaacgattgctcatacttccatgatactcctgcttattgaaagacat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attattttgcatcaaacgattgctcatacttccatgatactcctgcttattgaaagacat 443
Query: 245 ttgtcttcttcacccatgtagatcctttcattgcctctgtggtggtttacatgagaatga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttgtcttcttcacccatgtagatcctttcattgcctctgtggtggtttacatgagaatga 503
Query: 305 cccccatagaatcacaggaagt--ttcactgttaagagtgtgtggccttgttggaggaag 362
||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||
Sbjct: 504 cccccatagaatcacag--attgcttcactgttaagagtgtgtggccttgttggaggaag 561
Query: 363 tatgtcactttggatagacttggtgatttcagatgttgaagccagtgtgactctctcttc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tatgtcactttggatagacttggtgatttcagatgttgaagccagtgtgactctctcttc 621
Query: 423 ctgttgtttcctaaccatttt-gcagagctatctttctgcaaccaagaaaagcaagattt 481
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 622 ctgttgtttcctaaccatttttgcagagctatctttctgcaaccaagaaaggcaagattt 681
Query: 482 aggagtttaatctcttgagctggtcagtgaggctcgagaatgacgggtttgttcttcctc 541
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 682 aggagtttaatctcttgagctggtcagtgaggctcaagaatgacgggtttgttcttcctc 741
Query: 542 tcatctagtaaatatttctttagagattcctactttgtttatttctatttaaatgaccaa 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tcatctagtaaatatttctttagagattcctactttgtttatttctatttaaatgaccaa 801
Query: 602 atcccctgatttgagcagagc 622
|||||||||||||||||||||
Sbjct: 802 atcccctgatttgagcagagc 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_h22.g1 MSMg01no481_h22.g1 CHROMAT_FILE:
MSMg01no481_h22.g1 PHD_FILE: MSMg01no481_h22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:09 2005
(667 letters)
>mm_chr12_59510389_59511455
Length = 1067
Score = 1245 bits (644), Expect = 0.0
Identities = 662/668 (99%), Gaps = 2/668 (0%)
Strand = Plus / Minus
Query: 1 cctaatttttattcaattgaaatatgaaattcaaaggaagctccaaaaattcctcatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 cctaatttttattcaattgaaatatgaaattcaaaggaagctccaaaaattcctcatctt 808
Query: 61 ctttctgtttgttttttcttaagattgccttgctcctttaaaaattccctgaaatccgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ctttctgtttgttttttcttaagattgccttgctcctttaaaaattccctgaaatccgac 748
Query: 121 agtgcttttttcatttggggattgaatgtatgaattatacatccaaggcaaatgtgtcaa 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 agtgc-tttttcatttggggattgaatgtatgaattatacatccaaggcaaatgtgtcaa 689
Query: 181 caatgagcaacatcctgagtcagacattaccctcttaatggcagtcatatatttagaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 caatgagcaacatcctgagtcagacattaccctcttaatggcagtcatatatttagaatt 629
Query: 241 tgtatttcaaaacttaacatttaatgaataacttaaaaattctggtgtgagtatgtatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tgtatttcaaaacttaacatttaatgaataacttaaaaattctggtgtgagtatgtatgt 569
Query: 301 tttacttaattggacc-tttaaaaaaaagttttttttatttgcttatttaacttaatgta 359
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 568 tttacttaattggaccttttaaaaaaaagttttttctatttgcttatttaacttaatgta 509
Query: 360 tttaatttgaaacagatttagagtcatgggaacatctaagactaggccccctttcctctg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tttaatttgaaacagatttagagtcatgggaacatctaagactaggccccctttcctctg 449
Query: 420 attgagcaaatgtcaataacaaatgtgtgcaaaatacttagacactgaaattgaagttca 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 attgagcaaatgtcaataacaaatgtgtgcaaaatacttagacactgaaattgaagttcg 389
Query: 480 tcatgactgcccagtgattgacttgcatttgaacatccatgtccctctcaaaggagccgt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tcatgactgcccagtgattgacttgcatttgaacatccatgtccctctcaaaggagccgt 329
Query: 540 tctctgaaacgcccagtgagctgcctcacatacctttgccatctgtctcagcagcagttc 599
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tctctgaaatgcccagtgagctgcctcacatacctttgccatctgtctcagcagcagttc 269
Query: 600 agcactgccttgttagccacctgccttcccggggctgctgctctgctctctatgtgccat 659
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 268 agcactgccttgttagccacttgccttcccggggctgctgctctgctctctatgtgccat 209
Query: 660 ccctcatt 667
||||||||
Sbjct: 208 ccctcatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
