Query= MSMg01no482_c19.b1 MSMg01no482_c19.b1 CHROMAT_FILE:
MSMg01no482_c19.b1 PHD_FILE: MSMg01no482_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:01 2005
(630 letters)
>mm_chr12_55388129_55389158
Length = 1030
Score = 1141 bits (590), Expect = 0.0
Identities = 618/630 (98%), Gaps = 5/630 (0%)
Strand = Plus / Plus
Query: 1 atggagactgtcaaattctaaaggggctttggagtggcagatccctgtcaaggagccaac 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 atggagactgtcaaattctaaaggggctttggggtggcagatccctgtcaaggagccaac 260
Query: 61 cactcctgtcccattaggagttggcagctggtcgtatacctcccgtacagtgctcttttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactcctgtcccattaggagttggcagctggtcgtatacctcccgtacagtgctcttttc 320
Query: 121 tatgcctctccctgtcacaggcctggctgttgctagctgtgcccttttcctttgggtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgcctctccctgtcacaggcctggctgttgctagctgtgcccttttcctttgggtcac 380
Query: 181 agtttccctcaaggccccaaacctcccctccctccccatttcccagaacatgatgatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 agtttccctcaaggccccaaacctcccctccctccccatttcccagaacatgatggtatt 440
Query: 241 aattatggctggctcgtatctgctatgcattccatgccacttgcagctccagcctgcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aattatggctggctcgtatctgctatgcattccatgccacttgcagctccagcctgcttt 500
Query: 301 ccttactcatcactgcaaccctataggatgcatacaattatcttcttgctcagtacacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccttactcatcactgcaaccctataggatgcatacaattatcttcttgctcagtacacga 560
Query: 361 gtaaaccaaagcttggcaagagtcagtaactttgtccaagtcacgtagacagtgaggtgg 420
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 561 gtaaaccaaagcttggcaagaatcagtgactttgtccaagtcacgtagacagtgaggtgg 620
Query: 421 cagagctaggaagcaagtccaggctgcctacgtccaggatccaaactcctactttctccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 621 cagagctaggaagcaagtccaggctgcctacgtccaggatccaaactcctactttcttcc 680
Query: 481 cattaatgaccaagtccttatgaatcaccatttgaaaaacaaaacaaaacaaaacaaaaa 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 681 cattaatgaccaagtccttatgaatcaccatttgaaaaacaaaacaaaacaaaa-----a 735
Query: 541 acattttgggttcccaggtctgcttcagtggagtgaccagcactcaaaggcagcatgagg 600
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 736 acattttgggttcccaggtctgcttcagtggagtgaccagcactcaaacgcagcatgagg 795
Query: 601 attttatagctctctgttttgtgtgtagtc 630
||||||||||||||| ||||||||||||||
Sbjct: 796 attttatagctctctcttttgtgtgtagtc 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_c19.g1 MSMg01no482_c19.g1 CHROMAT_FILE:
MSMg01no482_c19.g1 PHD_FILE: MSMg01no482_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:02 2005
(384 letters)
>mm_chr12_55544777_55545561
Length = 785
Score = 723 bits (374), Expect = 0.0
Identities = 380/382 (99%), Gaps = 1/382 (0%)
Strand = Plus / Minus
Query: 1 ttccagtttggagactactctgttctgactgatttcccttgggggcacaggttggcaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ttccagtttggagactactctgttctgactgatttcccttgggggcacaggttggcaacc 338
Query: 61 gtcattttcaggtttatatctcccttgattaacacac-gggtcaaactgaagtagggtct 119
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 337 gtcattttcaggtttatatctcccttgattaagacacggggtcaaactgaagtagggtct 278
Query: 120 aagtctagttttacatctaaattgtgtaactattaaccacatttactcaatacactgtaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aagtctagttttacatctaaattgtgtaactattaaccacatttactcaatacactgtaa 218
Query: 180 aatagatacagtttctgccctagatatttgttatttctccgtactgggagcgtttgaaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 aatagatacagtttctgccctagatatttgttatttctccgtactgggagcgtttgaaac 158
Query: 240 cctttatctagatatctgaagtgatgttaagtcattgtttgcctttgctgtgtttctatg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 cctttatctagatatctgaagtgatgttaagtcattgtttgcctttgctgtgtttctatg 98
Query: 300 tgacagagcactgtaacgtctgactgtattttggtgcctatgatctatcttccttctttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 tgacagagcactgtaacgtctgactgtattttggtgcctatgatctatcttccttctttc 38
Query: 360 ccttgtcccccgccttctcaga 381
||||||||||||||||||||||
Sbjct: 37 ccttgtcccccgccttctcaga 16
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 785
Length adjustment: 9
Effective length of query: 375
Effective length of database: 776
Effective search space: 291000
Effective search space used: 291000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
