Query= MSMg01no483_g18.b1 MSMg01no483_g18.b1 CHROMAT_FILE:
MSMg01no483_g18.b1 PHD_FILE: MSMg01no483_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:37 2005
(582 letters)
>mm_chr11_61163861_61164842
Length = 982
Score = 1102 bits (570), Expect = 0.0
Identities = 576/578 (99%), Gaps = 1/578 (0%)
Strand = Plus / Plus
Query: 5 gaattctctggtcagagccataatttacatgtttgaaaaaccatacaggaaattgatagc 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgggcagagccataatttacatgtttgaaaaaccatacaggaaattgatagc 264
Query: 65 cattgtgattaatcagtctgcttgtaaaaacctgcagccttctgaggcactgcggggaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cattgtgattaatcagtctgcttgtaaaaacctgcagccttctgaggcactgcggggaac 324
Query: 125 ctcttacatgctgcacactctaatgctggcaacaggaaagataaaaccaaccttactgta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcttacatgctgcacactctaatgctggcaacaggaaagataaaaccaaccttactgta 384
Query: 185 tttctatttaagaggccactagaatgactgagtacaggtctcacacatccctcacctccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttctatttaagaggccactagaatgactgagtacaggtctcacacatccctcacctccc 444
Query: 245 cagggcctccactctttccctccaagaatccccagctccctctactttgcccacaacaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cagggcctccactctttccctccaagaatccccagctccctctactttgcccacaacaga 504
Query: 305 tacacttcatgaaatgagtaagtaggccaaatatagaccctgggatatagatgtatctat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tacacttcatgaaatgagtaagtaggccaaatatagaccctgggatatagatgtatctat 564
Query: 365 attttaaagtagattcctttctaaaattttaactcagctggacatgggaacacacacctg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attttaaagtagattcctttctaaaattttaactcagctggacatgggaacacacacctg 624
Query: 425 taatcccagcgcttaggaggctaaggcaggctgatcccatgttcaagacctgcatggact 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taatcccagcgcttaggaggctaaggcaggctgatcccatgttcaagacctgcatggact 684
Query: 485 acatgggaagactctaaaaaaaaaacaaaaacaataacaacaaaacaaagttggatgtag 544
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 685 acatgggaagactctaaaaaaaaaa-aaaaacaataacaacaaaacaaagttggatgtag 743
Query: 545 ctggacatgatggtgcatgcctggaatccctgaactca 582
||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctggacatgatggtgcatgcctggaatccctgaactca 781
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_g18.g1 MSMg01no483_g18.g1 CHROMAT_FILE:
MSMg01no483_g18.g1 PHD_FILE: MSMg01no483_g18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:37 2005
(554 letters)
>mm_chr12_27564657_27565610
Length = 954
Score = 1071 bits (554), Expect = 0.0
Identities = 554/554 (100%)
Strand = Plus / Minus
Query: 1 tttgaaacctcatgtccattgggagctccaatcccagtgagggatattgaccttggaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 tttgaaacctcatgtccattgggagctccaatcccagtgagggatattgaccttggaaaa 695
Query: 61 gctcaagtgaaactggttacgagcaaaggcagtggcaatggactctggttcaccctgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gctcaagtgaaactggttacgagcaaaggcagtggcaatggactctggttcaccctgggc 635
Query: 121 tatgtcagcacacagtatggggtttgataagtgggggtgtgaattcaaatgcacttttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tatgtcagcacacagtatggggtttgataagtgggggtgtgaattcaaatgcacttttca 575
Query: 181 tgccaggcaaagctgtgcaatggaaatgatgtagtgcggacttcagcacaccacacataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tgccaggcaaagctgtgcaatggaaatgatgtagtgcggacttcagcacaccacacataa 515
Query: 241 ggtcatgggtacccaaggtactctgtagttaagcctgatctttcaattcaggtggggttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggtcatgggtacccaaggtactctgtagttaagcctgatctttcaattcaggtggggttg 455
Query: 301 ctgattgataaacaagcctctgatatacaaaataacaagtacccccacccagtctttaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ctgattgataaacaagcctctgatatacaaaataacaagtacccccacccagtctttaca 395
Query: 361 ataaaatgtaacagacaaccaattaagaaatctttggggacatgtttatagagcctctag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ataaaatgtaacagacaaccaattaagaaatctttggggacatgtttatagagcctctag 335
Query: 421 tacacagctatagctacagggactgggaaattgaatctgtgggtaagagctcttaatgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tacacagctatagctacagggactgggaaattgaatctgtgggtaagagctcttaatgca 275
Query: 481 taagcctgagagctcaagttagcattctcagtatatgtgtaaaaactcaggaatttacat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 taagcctgagagctcaagttagcattctcagtatatgtgtaaaaactcaggaatttacat 215
Query: 541 gcatgactttcacc 554
||||||||||||||
Sbjct: 214 gcatgactttcacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
