Query= MSMg01no483_l02.b1 MSMg01no483_l02.b1 CHROMAT_FILE:
MSMg01no483_l02.b1 PHD_FILE: MSMg01no483_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:59 2005
(690 letters)
>mm_chr12_35010426_35011514
Length = 1089
Score = 1104 bits (571), Expect = 0.0
Identities = 592/599 (98%), Gaps = 1/599 (0%)
Strand = Plus / Minus
Query: 92 ttcctgctgtgttctgtactggtacttcccctctgtgcataggtatgctacctagtttta 151
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 ttcctgctgtgttctgcactggtacttcccctctgtgcataggtatgctacctagtttta 1030
Query: 152 tgtcaacctgacacatgttagagtgtttcaggaaaattggaacctcaaccacaaaatgcc 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 tgtcaacctgacacatgttagagtgtttcaggaaaattggaacctcaaccacaaaatgcc 970
Query: 212 tgcactgaattaggctgcaggcaagcctgtggtgattttttggttatggtgttttaccgc 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 969 tgcactgaattaggctgcaggcaagcctgtggtgattttttggttatggtgttttaccgc 910
Query: 272 ataaatagaaaccctaagtaacatattaagggaagtgggcttatgcttcacaccaaagga 331
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 909 agaaatagaaaccctaagtaacatattaagggaagtgggcttatgcttcacaccaaagga 850
Query: 332 acactttgtcttttacctaacatgcattttttagcacagtaaatatgttttacaattttt 391
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 849 acactttgtcttttacctaacatgcattttttagcatagtaaatatgttttacaa-tttt 791
Query: 392 tatatgtaattacataattacatatatgtgtaaaccctgaaatttatattcaaactataa 451
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 790 tatatgtaattacataattacatatatatgtaaaccctgaaatttatattcaaactataa 731
Query: 452 agatataacactgtctatacaaaatgggagtaaaccaaaatgaggtcaaaaggaaagatt 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 agatataacactgtctatacaaaatgggagtaaaccaaaatgaggtcaaaaggaaagatt 671
Query: 512 ttaaaataaattttaaggtattggtacagaaacgttcttgtactatacctaacacaaatt 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ttaaaataaattttaaggtattggtacagaaacgttcttgtactatacctaacacaaatt 611
Query: 572 cacattgtaccattcttgagtttctgcaaacaactgaattgttttagtacagtcagcatt 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cacattgtaccattcttgagtttctgcaaacaactgaattgttttagtacagtcagcatt 551
Query: 632 ctgtgtagccatttgcatagtcattttaggaaaagttgactgtgctaccatgagcagtt 690
|| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 550 ctatgtagccatttgcatagtcattttaggaaaagttgactgtgctaccgtgagcagtt 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1089
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1079
Effective search space: 733720
Effective search space used: 733720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_l02.g1 MSMg01no483_l02.g1 CHROMAT_FILE:
MSMg01no483_l02.g1 PHD_FILE: MSMg01no483_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:59 2005
(158 letters)
>mm_chr12_34912859_34913418
Length = 560
Score = 294 bits (152), Expect = 2e-84
Identities = 156/158 (98%), Gaps = 2/158 (1%)
Strand = Plus / Plus
Query: 1 aacacttggagcatatacagtgtttccagttgatcctttcccttttaatctttgagtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacacttggagcatatacagtgtttccagttgatcctttcccttttaatctttgagtatt 260
Query: 61 tagatggtcatagtaaaaattagcaatgtttactccatacaattttgatttatttcctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagatggtcatagtaaaaattagcaatgtttactccatacaattttgatttatttcctgt 320
Query: 121 ttttttt--agtcctatggaatttctttttaatttaca 156
||||||| |||||||||||||||||||||||||||||
Sbjct: 321 tttttttttagtcctatggaatttctttttaatttaca 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 560
Length adjustment: 8
Effective length of query: 150
Effective length of database: 552
Effective search space: 82800
Effective search space used: 82800
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
