Query= MSMg01no487_h15.b1 MSMg01no487_h15.b1 CHROMAT_FILE:
MSMg01no487_h15.b1 PHD_FILE: MSMg01no487_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:06 2005
(629 letters)
>mm_chr12_34477617_34478646
Length = 1030
Score = 1149 bits (594), Expect = 0.0
Identities = 618/626 (98%), Gaps = 2/626 (0%)
Strand = Plus / Plus
Query: 6 gaattcatcttttcatctc-catctccctttttaatacttgtgtgtttaggtttgggcca 64
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcatcttttcatcacacatctccctttttaatacttgtgtgtttaggtttgggcca 265
Query: 65 atctggatgacttaagaacatatcaaaatagagataccgttccttgatcttttactgccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atctggatgacttaagaacatatcaaaatagagataccgttccttgatcttttactgccc 325
Query: 125 aaaggctccttttatttacttactttaagtaaggggcttggagaaaggggataatcatta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaaggctccttttatttacttactttaagtaaggggcttggagaaaggggataatcatta 385
Query: 185 ctaatgaatttggtgctggtgaaaaataccagatgggccgtcacagggtctggagtcctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ctaatgaatttggtgctggtgaaaaataccagatgggccgtcacagggtctggagtcctt 445
Query: 245 ttacccacaggctaaggcaaaatacttctctgtgtggtttgattccagatgtaacctgga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttacccacaggctaaggcaaaatacttctctgtgtggtttgattccagatgtaacctgga 505
Query: 305 gtctagattatcttccacgtccagacctgcacagtctcaccttcctgaatcagtatcttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gtctagattatcttccacgtccagacctgcacagtctcaccttcctgaatcagtatcttc 565
Query: 365 acatttcagcacccactgcttcctgtatatctcagctgcacagaattccctttcttgggt 424
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atatttcagcacccactgcttcctgtatatctcagctgcacagaattccctttcttgggt 625
Query: 425 tactttttaaaaaaagaaaagtgaaggcatgaagttgggaggtagacttgttcaagggca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tactttttaaaaaaagaaaagtgaaggcatgaagttgggaggtagacttgttcaagggca 685
Query: 485 tctgtgtgtgtgtgtgtgtg-ggggggatgctcggtatggatataatcaaaatacactgt 543
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tctgtgtgtgtgtgtgtgggaggggggatgctcggtatggatataatcaaaatacactgt 745
Query: 544 atacatgtgtgaagtttccagaaagaaaatattattattttaaaaagagagataactact 603
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 746 atacatgtgtgaagtttccagaaagaaaatattattatttttaaaagagagataactact 805
Query: 604 ccttgtcattctcagactcttttcca 629
||| || |||||||||||||||||||
Sbjct: 806 cctcgttattctcagactcttttcca 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1030
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1020
Effective search space: 631380
Effective search space used: 631380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_h15.g1 MSMg01no487_h15.g1 CHROMAT_FILE:
MSMg01no487_h15.g1 PHD_FILE: MSMg01no487_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:06 2005
(677 letters)
>mm_chr12_34553141_34554217
Length = 1077
Score = 1075 bits (556), Expect = 0.0
Identities = 566/570 (99%), Gaps = 2/570 (0%)
Strand = Plus / Minus
Query: 110 taggtaaagatcctttcccaatctgttggtggcctttttgtcttattgatggtgtctttt 169
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1077 taggtaaagatcctttcccaatctgttggtggcctttttgtcttattgacggtgtctttt 1018
Query: 170 gctttgcagaagctttgcaattttatgaggtcccatttatcgattcttaattttacagca 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 gctttgcagaagctttgcaattttatgaggtcccatttatcgattcttaattttacagca 958
Query: 230 caagccattgctgttctattcaggaaattttcccctgtacccatattttttaat--tata 287
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 957 caagccattgctgttctattcaggaaattttcccctgtacccatattttttaattatata 898
Query: 288 tatatatatacatatatataatgatgataacaataagattctagagacataaatatatat 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 tatatatatacatatatataatgatgataacaataagattctagagacataaatatatat 838
Query: 348 aaaatacatgatatatgatatatattttcctctgttttcatagatgtttataaatataca 407
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 837 aaaatacatgatatatgatatgtattttcctctgttttcatagatgtttataaatataca 778
Query: 408 gatgttcagtcactactatgaaggctaatatcgagtacttattgaataattactataaaa 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 gatgttcagtcactactatgaaggctaatatcgagtacttattgaataattactataaaa 718
Query: 468 aagtgaacactatgctaaataaggtgaaaagttaaaactattcatttattttcaatgcta 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 aagtgaacactatgctaaataaggtgaaaagttaaaactattcatttattttcaatgcta 658
Query: 528 acattactttaatactatttttttcctagtaagtatacttgcattttttcagattccact 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 acattactttaatactatttttttcctagtaagtatacttgcattttttcagattccact 598
Query: 588 aagaatcatactttcagatgagagtatttcactggaagcaaaatttcttgtttccagttc 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aagaatcatactttcagatgagagtatttcactggaagcaaaatttcttgtttccagttc 538
Query: 648 aattatttgatggctttgtgattgatgatc 677
||||||||||||||||||||||||||||||
Sbjct: 537 aattatttgatggctttgtgattgatgatc 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
