NNAACCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCTCACTTACCTTGCTAATTTCTAACTTAAGTTAGAGACCAGTT
TGCAAGAATGAGAGGAGACATTTTAGGAGGAAAACATGACTACAGCAATC
AGGCCCTTTCTCTTCCAGGGCTTACAATAAAAAAAGCATTTAACTGCTCA
TTCCAGTGTTTGTTTACTTGGACTTTTTTAAATGGCCGTGTCTTATTCCT
CCCTTAAGCAGTTGAGTCTACCTAGGGTTCTAGGCTGGCTGTTAGACTCA
TTAGCATATGGCCCATTAACAAAGATGATGTGAAGGGAAGACTGAACATA
CTTGGGGGGGGGTGCTCACCCCTCCTCCTGCCACATGCAGCCACCTAAAC
TGCTCCTCCAACTCAATAATCCCAGATGAATCCTAACCACTATATAACAA
ACCCATCAAAACTGTGGCCTTGATCTTATCCTGAAGCTGGGAGAAGAGAG
CCAAAGACAGACAACTGAGCTTCTTTCCAGTATTTCTGGCTTTGCCCTGT
CCTTTTTCACTTGAAAAATTGATATGATTATCAGACAAGAGGAAGTAGGT
GCTTCAAGTTGATTTTCAAATGAATGGCACAATATTTATTATACCTATCA
GAGAATGAATCTTTGTACTGTGGTAGAAAAGAGTGTCATAATACATGCCA
CAGATTTTGAGATTCTTTTCTATTCAAAAAATGGTGGATCTCATACCTTG
GCCTN

CCCGCCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTATGCAGCTATGGGAAGTGGAA
TAAAGAGAATCCTCATATGCTTACAAGACAGCTAGCCTAAGCTCCACTGG
AGGGAGGGAAAGAGGGGGAGGAGGAGAGACAGGGGGAGGAGGACGGGGGA
GAACAGTGAAGGGAGCTCTGAGACTGTCCTTTCACTTCTGCATACATGCT
TTTGTTTACATATACCTGGATTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCGCTCTCTTTTTTTTTTTCAGACGCACAGATGCGGGTGCG
GTGTGGTTCGCTTTTTTCTCGTGACCCTTCCTCTTTCCGAGTTTTTTGAC
TTTAATGTGTTTGTTTGTGTTGTTTGTTCCACTCTTTTTTTCTCCTTTTC
CTGTCGCTGTTTTTCCGTTTTATTCTTTCTGTCTTCTGTTTGGTCCTCTT
TTTATTGCCTCTTTTACTTTCCCGCTTTTTGTTCTGTCTTGTGCTTTGGC
GCCGTCGGTTTGTAACTGGCGTATTGTCCTCCCCCTGGTGGTTACCTTGT
CTTTGCGTTCCCGTTCTCTGTTGTGTCACGTCCTCTTTTGTTGTTACCCG
GCTTTAATGACTTTGCCGCTGTATTGGCGCTTTCGATTTGACTTTCTCCA
CCCCAGTTGTGTTCTCGCTCGGACGCCCAGTTTGATTTTTTTTATTTGCG
GCCGTTCGTCTGTTGTGGCGCTGTCGTCGCTTACCTCTTTCGTGGGCTCA
TTTCTTCGTTACTGTCCTCCGGCACGCACCCGCCCCTTTTCTTTTTTTCC
TCTTGGGCAGCGTAGCN

Query= MSMg01no490_d11.b1 MSMg01no490_d11.b1 CHROMAT_FILE:
MSMg01no490_d11.b1 PHD_FILE: MSMg01no490_d11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:44 2005
         (706 letters)



>mm_chr12_91426264_91427370
          Length = 1107

 Score = 1290 bits (667), Expect = 0.0
 Identities = 682/687 (99%), Gaps = 1/687 (0%)
 Strand = Plus / Minus

                                                                       
Query: 21  ttgctaatttctaacttaagttagagaccagtttgcaagaatgagaggagacattttagg 80
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 ttgctaatttctaactttagttagagaccagtttgcaagaatgagaggagacattttagg 848

                                                                       
Query: 81  aggaaaacatgactacagcaatcaggccctttctcttccagggcttacaataaaaaaagc 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 aggaaaacatgactacagcaatcaggccctttctcttccagggcttacaataaaaaaagc 788

                                                                       
Query: 141 atttaactgctcattccagtgtttgtttacttggacttttttaaatggccgtgtcttatt 200
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 787 atttaactgctcattccagtgtttgtttacttggactttttgaaatggccgtgtcttatt 728

                                                                       
Query: 201 cctcccttaagcagttgagtctacctagggttctaggctggctgttagactcattagcat 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 cctcccttaagcagttgagtctacctagggttctaggctggctgttagactcattagcat 668

                                                                       
Query: 261 atggcccattaacaaagatgatgtgaagggaagactgaacatactt-gggggggggtgct 319
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 667 atggcccattaacaaagatgatgtgaagggaagactgaacatacttggggggggggtgct 608

                                                                       
Query: 320 cacccctcctcctgccacatgcagccacctaaactgctcctccaactcaataatcccaga 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 cacccctcctcctgccacatgcagccacctaaactgctcctccaactcaataatcccaga 548

                                                                       
Query: 380 tgaatcctaaccactatataacaaacccatcaaaactgtggccttgatcttatcctgaag 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tgaatcctaaccactatataacaaacccatcaaaactgtggccttgatcttatcctgaag 488

                                                                       
Query: 440 ctgggagaagagagccaaagacagacaactgagcttctttccagtatttctggctttgcc 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ctgggagaagagagccaaagacagacaactgagcttctttccagtatttctggctttgcc 428

                                                                       
Query: 500 ctgtcctttttcacttgaaaaattgatatgattatcagacaagaggaagtaggtgcttca 559
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctgccctttttcacttgaaaaattgatatgattatcagacaagaggaagtaggtgcttca 368

                                                                       
Query: 560 agttgattttcaaatgaatggcacaatatttattatacctatcagagaatgaatctttgt 619
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 agttgattttcaaatgaatggcacaatatttattatacctatcagagaatgaatctttgt 308

                                                                       
Query: 620 actgtggtagaaaagagtgtcataatacatgccacagattttgagattcttttctattca 679
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 307 actgtggtagaaaagagtgtcataatacatgccacagatcttgagattcttttctattca 248

                                      
Query: 680 aaaaatggtggatctcataccttggcc 706
           |||||||||||||||||||||||||||
Sbjct: 247 aaaaatggtggatctcataccttggcc 221


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1107
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1097
Effective search space:   763512
Effective search space used:   763512
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)