Query= MSMg01no490_e04.b1 MSMg01no490_e04.b1 CHROMAT_FILE:
MSMg01no490_e04.b1 PHD_FILE: MSMg01no490_e04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:48 2005
(676 letters)
>mm_chr12_26403042_26404117
Length = 1076
Score = 1307 bits (676), Expect = 0.0
Identities = 676/676 (100%)
Strand = Plus / Plus
Query: 1 atgggtctctgtgagttgaggctagcctggtctacagatggaggcccaggatagccaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgggtctctgtgagttgaggctagcctggtctacagatggaggcccaggatagccaggg 260
Query: 61 ccactttctttaaagagtcgaggagatggtttctgacaaatgtcatccaggtactttatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccactttctttaaagagtcgaggagatggtttctgacaaatgtcatccaggtactttatc 320
Query: 121 tgtgtgaactctgtcaagctttcataggtgacagtattcaccccattttgcaaataaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgtgaactctgtcaagctttcataggtgacagtattcaccccattttgcaaataaata 380
Query: 181 gtctgtagttacaagagtaatgaaagattctttaatgagcaaataatagatttgggatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctgtagttacaagagtaatgaaagattctttaatgagcaaataatagatttgggatct 440
Query: 241 aaacttatgatgaactcatatgacagttctcaacctgatgttccaagttcatcttcttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaacttatgatgaactcatatgacagttctcaacctgatgttccaagttcatcttcttga 500
Query: 301 ttttatttctcccaaagtcattaacagtttgggaaattcccttcagcttcttcctgctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttatttctcccaaagtcattaacagtttgggaaattcccttcagcttcttcctgctat 560
Query: 361 agattcaatggaagaaaaaactaatttcacaactcgtccacgaacttggaggtattctgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agattcaatggaagaaaaaactaatttcacaactcgtccacgaacttggaggtattctgg 620
Query: 421 aacacaaatcttaaaactcaataaacaacttttaaatttattccttaaaaccatgtagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacacaaatcttaaaactcaataaacaacttttaaatttattccttaaaaccatgtagca 680
Query: 481 caatttttctcctctttggaaattatcataaaatgctaatttgatcaatttctcactgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caatttttctcctctttggaaattatcataaaatgctaatttgatcaatttctcactgtg 740
Query: 541 atgtcttttcaaaactgtagttgggagatgcatcggcactgcatctgattgtacagtatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgtcttttcaaaactgtagttgggagatgcatcggcactgcatctgattgtacagtatc 800
Query: 601 ccattcagaacaacaacaaaacttgcacctagccctggtcttggctctttttccttcttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ccattcagaacaacaacaaaacttgcacctagccctggtcttggctctttttccttcttt 860
Query: 661 cttggagctttattga 676
||||||||||||||||
Sbjct: 861 cttggagctttattga 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_e04.g1 MSMg01no490_e04.g1 CHROMAT_FILE:
MSMg01no490_e04.g1 PHD_FILE: MSMg01no490_e04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:48 2005
(591 letters)
>mm_chr12_26567975_26568966
Length = 992
Score = 1129 bits (584), Expect = 0.0
Identities = 590/592 (99%), Gaps = 1/592 (0%)
Strand = Plus / Minus
Query: 1 cataatttcaaggctacagtgtcccaagtggaaatctgaaagccacacctgattgtgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 cataatttcaaggctacagtgtcccaagtggaaatctgaaagccacacctgattgtgctc 733
Query: 61 ccgaagatctgagccctcaggtgcctctttaaggggggagacagccaatccttgagcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ccgaagatctgagccctcaggtgcctctttaaggggggagacagccaatccttgagcagg 673
Query: 121 gtccctttcttctcacagatgggcaagactttcttggtcctaattttttctgcagtaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gtccctttcttctcacagatgggcaagactttcttggtcctaattttttctgcagtaagc 613
Query: 181 caggtggtaggcccgttgagattgcagcaggcagtcatgccagcttgctgcttctctaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 caggtggtaggcccgttgagattgcagcaggcagtcatgccagcttgctgcttctctaga 553
Query: 241 tgatgatttttgttgaatggacaccttctttgaaatcaatagtgatttgaacacctccta 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgaggatttttgttgaatggacaccttctttgaaatcaatagtgatttgaacacctccta 493
Query: 301 cctaaaatctacacaaagcaaatatgtcaggaccctgaaacatcagtgaattacctaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 cctaaaatctacacaaagcaaatatgtcaggaccctgaaacatcagtgaattacctaaat 433
Query: 361 tcagaactgataatgaattccaaacagcagaagtgagataatgcccattaaaggtttgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tcagaactgataatgaattccaaacagcagaagtgagataatgcccattaaaggtttgct 373
Query: 421 gcagggtgtgggtggatg-aaaaaaaaaaaaaacacagtggcccaacaaggagagaggtg 479
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gcagggtgtgggtggatgaaaaaaaaaaaaaaacacagtggcccaacaaggagagaggtg 313
Query: 480 tgatgccagtcacagattgcggatggcgaaaaggtaacgttataaaaaacgactaagatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgatgccagtcacagattgcggatggcgaaaaggtaacgttataaaaaacgactaagatt 253
Query: 540 gggtagaagctctggagaatgtccaccccctgtcatccaaaaggcaaaggca 591
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gggtagaagctctggagaatgtccaccccctgtcatccaaaaggcaaaggca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 992
Length adjustment: 10
Effective length of query: 581
Effective length of database: 982
Effective search space: 570542
Effective search space used: 570542
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
