Query= MSMg01no492_h06.b1 MSMg01no492_h06.b1 CHROMAT_FILE:
MSMg01no492_h06.b1 PHD_FILE: MSMg01no492_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:41 2005
(418 letters)
>mm_chr12_25514495_25515313
Length = 819
Score = 766 bits (396), Expect = 0.0
Identities = 413/424 (97%), Gaps = 11/424 (2%)
Strand = Plus / Plus
Query: 1 tctaggattgtatcttatgctgcctactttaggttgcaatatgtttctaacacccacttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctaggattgtatcttatgctgcctactttaggttgcaatatgtttctaacacccacttt 260
Query: 61 ttaaggttttaaaatggtattttaatttttcccttcagtttatatgttcagccacctgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaggttttaaaatggtattttaatttttcccttcagtttatatgttcagccacctgta 320
Query: 121 cactttctcaacacgtccctaaaggggggggggg-aggagacagagacaaagaggtcctc 179
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 cactttctcaacacgtccctaaaggggggggggggaggagacagagacaaagaggtcctc 380
Query: 180 gatccaaggttatattaatagagaggtccagacttgggactattttaggaagtagattat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatccaaggttatattaatagagaggtccagacttgggactattttaggaagtagattat 440
Query: 240 tgtttttg-----tttgatttctaattggtcccagctagttggaacacaatattaagagt 294
|| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tg-----gacaggtttgatttctaattggtcccagctagttggaacacaatattaagagt 495
Query: 295 gaaagatctcaattattttctccccatcctctaaaagactaccttactaggactcagctg 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gaaagatctcaattattttctccccatcctctaaaagactaccttactaggactcagctg 555
Query: 355 ttcacccagagaatattagcagcaagagactatcccaactaaattcaataaccccctttt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttcacccagagaatattagcagcaagagactatcccaactaaattcaataaccccctttt 615
Query: 415 caga 418
||||
Sbjct: 616 caga 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 819
Length adjustment: 9
Effective length of query: 409
Effective length of database: 810
Effective search space: 331290
Effective search space used: 331290
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_h06.g1 MSMg01no492_h06.g1 CHROMAT_FILE:
MSMg01no492_h06.g1 PHD_FILE: MSMg01no492_h06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:41 2005
(466 letters)
>mm_chr12_25652057_25652922
Length = 866
Score = 866 bits (448), Expect = 0.0
Identities = 461/466 (98%), Gaps = 2/466 (0%)
Strand = Plus / Minus
Query: 1 actgtgtgcacttgtgtacatatgtgtacacacacacacactcacacacacacacacaca 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 506 actgtgtgcacttgtgtacatatgtgtacacacacacaca--cacacacacacacacaca 449
Query: 61 cacacagggataacaaccctgggctagagcatgtctagctttatcttgctcagccctcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cacacagggataacaaccctgggctagagcatgtctagctttatcttgctcagccctcag 389
Query: 121 gacctactccctgctagcctaataagccatatatcgctctgaaagttatgacaaggattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gacctactccctgctagcctaataagccatatatcgctctgaaagttatgacaaggattc 329
Query: 181 aagcataaataaaacatacttaaacagtaagagagatatagtgtagaggaattttagtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aagcataaataaaacatacttaaacagtaagagagatatagtgtagaggaattttagtcc 269
Query: 241 attttggctgctctggctgaaatacagacacacccttagtacatacctttaatcccaaac 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 atcaaggctgctctggctgaaatacagacacacccttagtacatacctttaatcccaaac 209
Query: 301 aacaaaggtcaaactagttggtagaaggatgcaactatgtttgaaagtggcttctagcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 aacaaaggtcaaactagttggtagaaggatgcaactatgtttgaaagtggcttctagcca 149
Query: 361 ggtgtggtggcgcacacctttaatcccagcacttgggaggcagaggcaggtggctttctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 ggtgtggtggcgcacacctttaatcccagcacttgggaggcagaggcaggtggctttctg 89
Query: 421 agtttgaggccagcctggtctacaaagtgagttctaggacagccag 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 agtttgaggccagcctggtctacaaagtgagttctaggacagccag 43
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
