TTGCGGTCGCAAACGACTCACATCCAAAGAGGGGCGCGGAATTCCAGGTT
TCTCTGAGGAACAGCTTTGTCTGGCTTGGTTCTGTAGTGGCAGGTGATCC
TAGCTCCAGTTTTGGAACTCTAGGATACTTACTTATGTTGTATGAGGACT
TGGGGAGCTGGAGACAGAGGCGCAAAGGGATCACATCAAGAAAACACGCC
GCCACCACCACCACCACCCCCGCCCCCCAACACACACACACACACACACA
CACACACACACACACACACACACACACAGAGAGAGAGAGAGATAAAAAGA
TATTTTTATAAAGATATTGAGAGAGAGTGTAGGATAATCTTTTTTTTAAC
ATTATTTTCTCTATTTACATTTCCAATGTTGTCCCCTTTCCTAGTTTCCC
CTCTGAAAATCCCCTATCCCCTCCCCCTCCCTCTGCTCTACAACGCACTC
ACTCCCATTCTTGGCCCTGGCATTCATCTGTACTGGGTGTTATAATCTTC
TTAAGATCCCGGGTCTTTCCTCCCACTGATGACCGACTAGGCCATCCTCC
GTGACATATGCAGCTAGAGCCGTGAGTCCAATATGTGTTTTCCTTGATTT
GTGTTTTAACTCCAGGGAGCTCTAGGGTGAGTTATTACCTTTATATGGTT
CTCCCATTGGGCTGTAAACGCCTTCAGCTTCTTGTGGACTTTCTCTAACT
TCTTGGGGACCC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAGGTCTACTGGAATAGGAACTGTCCATCTTCACT
AGCCCTACTCCTGGGTGTCCTTGCTCTGAGTGTCCCAGTGGGATATCCCT
CAGTGCTAGAGACAATTACAAATCTGTAACTGTAATTAAAGTACAATCAT
GGTCTAGAGCAGAGTGACTTGGATAAAAGATAGGACAAAGGGGGACCCTG
AGCTAGATACTCTACTGCTTTGATGCTTTGGGGATCCTTTGAGGACCCCA
AAATTTTGTGTAGTGGCCACTTTAGCCCCAAACACCAATTCTATGTGCAG
TAAAAAGCCCCTGCTTTTTAAAGGCAAATAACTCTGCAATCATTAACTAA
TACCTAATAAAATGTAGCCTTTAAAAGGGCTGTGGAGAACAGATGTTTCC
AGGTCTTAATGGGAAAGACGTATGACCATAATGCCTCAGAGGCAGACACC
CTCCATCACTTGCGTTAGAACCCAGCCAGGTACCCTGTCTGGGTGTTTGG
GTATGATCGATGAGAACGGCTGCTGGTGGCTTTAAGTCAAATCCTGTGTT
TGAACAGGTAAACATCACCCTCACAAATGTGCACTTGCATCAAGCACACA
CTCATGGGGCTCTGGGCTGCCCGCTGGCGATGTTTGAACAGACACAACTG
CCATGGGTTACCTTCAAAA

Query= MSMg01no494_b16.b1 MSMg01no494_b16.b1 CHROMAT_FILE:
MSMg01no494_b16.b1 PHD_FILE: MSMg01no494_b16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:52 2005
         (224 letters)



>mm_chr12_27153570_27154193
          Length = 624

 Score =  426 bits (220), Expect = e-124
 Identities = 223/224 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagctttgtctggcttggttctgtagtggcaggtgatcctagctccagttttggaactct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 cagctttgtctggcttggttctgtagtggcaggtgatcctagctccagttttggaactct 309

                                                                       
Query: 61  aggatacttacttatgttgtatgaggacttggggagctggagacagaggcgcaaagggat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aggatacttacttatgttgtatgaggacttggggagctggagacagaggcgcaaagggat 249

                                                                       
Query: 121 cacatcaagaaaacacgccgccaccaccaccaccacccccgccccccaacacacacacac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cacatcaagaaaacacgccgccaccaccaccaccacccccgccccccaacacacacacac 189

                                                       
Query: 181 acacacacacacacacacacacacacacacacacacagagagag 224
           ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 188 acacacacacacacacacacacacacacacacacagagagagag 145


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 21
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space:   132225
Effective search space used:   132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no494_b16.g1 MSMg01no494_b16.g1 CHROMAT_FILE:
MSMg01no494_b16.g1 PHD_FILE: MSMg01no494_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:52 2005
         (651 letters)



>mm_chr12_26973273_26974323
          Length = 1051

 Score = 1259 bits (651), Expect = 0.0
 Identities = 651/651 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtctactggaataggaactgtccatcttcactagccctactcctgggtgtccttgctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggtctactggaataggaactgtccatcttcactagccctactcctgggtgtccttgctc 260

                                                                       
Query: 61  tgagtgtcccagtgggatatccctcagtgctagagacaattacaaatctgtaactgtaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagtgtcccagtgggatatccctcagtgctagagacaattacaaatctgtaactgtaat 320

                                                                       
Query: 121 taaagtacaatcatggtctagagcagagtgacttggataaaagataggacaaagggggac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaagtacaatcatggtctagagcagagtgacttggataaaagataggacaaagggggac 380

                                                                       
Query: 181 cctgagctagatactctactgctttgatgctttggggatcctttgaggaccccaaaattt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgagctagatactctactgctttgatgctttggggatcctttgaggaccccaaaattt 440

                                                                       
Query: 241 tgtgtagtggccactttagccccaaacaccaattctatgtgcagtaaaaagcccctgctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgtagtggccactttagccccaaacaccaattctatgtgcagtaaaaagcccctgctt 500

                                                                       
Query: 301 tttaaaggcaaataactctgcaatcattaactaatacctaataaaatgtagcctttaaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttaaaggcaaataactctgcaatcattaactaatacctaataaaatgtagcctttaaaa 560

                                                                       
Query: 361 gggctgtggagaacagatgtttccaggtcttaatgggaaagacgtatgaccataatgcct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggctgtggagaacagatgtttccaggtcttaatgggaaagacgtatgaccataatgcct 620

                                                                       
Query: 421 cagaggcagacaccctccatcacttgcgttagaacccagccaggtaccctgtctgggtgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagaggcagacaccctccatcacttgcgttagaacccagccaggtaccctgtctgggtgt 680

                                                                       
Query: 481 ttgggtatgatcgatgagaacggctgctggtggctttaagtcaaatcctgtgtttgaaca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgggtatgatcgatgagaacggctgctggtggctttaagtcaaatcctgtgtttgaaca 740

                                                                       
Query: 541 ggtaaacatcaccctcacaaatgtgcacttgcatcaagcacacactcatggggctctggg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggtaaacatcaccctcacaaatgtgcacttgcatcaagcacacactcatggggctctggg 800

                                                              
Query: 601 ctgcccgctggcgatgtttgaacagacacaactgccatgggttaccttcaa 651
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctgcccgctggcgatgtttgaacagacacaactgccatgggttaccttcaa 851


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space:   667281
Effective search space used:   667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)