Query= MSMg01no494_o04.b1 MSMg01no494_o04.b1 CHROMAT_FILE:
MSMg01no494_o04.b1 PHD_FILE: MSMg01no494_o04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:50 2005
(451 letters)
>mm_chr12_29595649_29596500
Length = 852
Score = 789 bits (408), Expect = 0.0
Identities = 435/452 (96%), Gaps = 15/452 (3%)
Strand = Plus / Plus
Query: 4 ggaattctctaggttc----cagttcttccttcagcctcttcaggtctctgtttcgtcag 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctagg---aaaacagttcttccttcagcctcttcaggtctctgtttcgtcag 260
Query: 60 gtccactttcccataatccaatgaggaggccaggctatactatgcacagtttacagaatg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtccactttcccataatccaatgaggaggccaggctatactatgcacagtttacagaatg 320
Query: 120 gttaacttgtagatttgaatagcaaagggacagagatgggagcaggttgtctttccacag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttaacttgtagatttgaatagcaaagggacagagatgggagcaggttgtctttccacag 380
Query: 180 gggcctcgaggtggtcaccctgtttcctgtgctacctgctctgacagagcatcagagttc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcctcgaggtggtcaccctgtttcctgtgctacctgctctgacagagcatcagagttc 440
Query: 240 tggaagcatccttcactttctttctttctttctttctttctttctttctttctttctttc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggaagcatccttcactttctttctttctttctttctttctttctttctttctttctttc 500
Query: 300 tttctttctttctttctttctttctttctttctttcttttatttttctttttttcttttt 359
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 tttctttctttctttctttctttctttcttt--------tatttttctttttttcttttt 552
Query: 360 ctttctttctttctttcttttttttttttttttggtggtgttgttgttgtttttgagaca 419
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 553 ctttctttctttctttcttttttttttttttttgttgttgttgttgttgtttttgagaca 612
Query: 420 gggtttctctttatagccctggctgtcctaga 451
||||||||||||||||||||||||||||||||
Sbjct: 613 gggtttctctttatagccctggctgtcctaga 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 90
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 852
Length adjustment: 10
Effective length of query: 441
Effective length of database: 842
Effective search space: 371322
Effective search space used: 371322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_o04.g1 MSMg01no494_o04.g1 CHROMAT_FILE:
MSMg01no494_o04.g1 PHD_FILE: MSMg01no494_o04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:50 2005
(236 letters)
>mm_chr12_29785581_29786216
Length = 636
Score = 451 bits (233), Expect = e-131
Identities = 233/233 (100%)
Strand = Plus / Minus
Query: 1 actcgtcacttgtagactctatatccagactcctcagagagatcccggcatgtcacccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 actcgtcacttgtagactctatatccagactcctcagagagatcccggcatgtcacccgc 327
Query: 61 atccccgacaggaagtcaccttttactatatggttgggtccacccacagagcctctattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atccccgacaggaagtcaccttttactatatggttgggtccacccacagagcctctattt 267
Query: 121 ctggagatgacactgaacaaggaaatggagattgcttggtgctacaggaagcttatacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ctggagatgacactgaacaaggaaatggagattgcttggtgctacaggaagcttatacac 207
Query: 181 gggaaagaggaggaaaaaggggaaggggaggaggaggaggaggaggaggaaga 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gggaaagaggaggaaaaaggggaaggggaggaggaggaggaggaggaggaaga 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
