Query= MSMg01no495_o14.b1 MSMg01no495_o14.b1 CHROMAT_FILE:
MSMg01no495_o14.b1 PHD_FILE: MSMg01no495_o14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:04 2005
(374 letters)
>mm_chr12_88306060_88306834
Length = 775
Score = 659 bits (341), Expect = 0.0
Identities = 367/379 (96%), Gaps = 9/379 (2%)
Strand = Plus / Plus
Query: 1 gaaattgactgtgaaatgtcaaagaaaaaaataaaagtcacttacttgaaagcaatttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaattgactgtgaaatgtcaaagaaaaaaataaaagtcacttacttgaaagcaatttgg 260
Query: 61 tctatttgctttgtaactgcttaaaaattttaaggcctgggcctgtagccatgggtagag 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 tctatttgctttgtaactgcttaaaaattttaaggcctgggcctatagccatgggtagag 320
Query: 121 tgcttgcctagggtgtgtgatgccctgggtgccacccctagaaccactgccctccatccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcttgcctagggtgtgtgatgccctgggtgccacccctagaaccactgccctccatccc 380
Query: 181 actgcctcagaaaccctggaagtttcaagcattgccttgtgttgtttgtggtcggctgct 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 actgcctcagaaaccctggaagtttcaagcattgccttgtgttgtttggggtcggctgct 440
Query: 241 ---tattttttga-gactgaatgctgtgtgtagtggcctgagtagcctgccaagctggca 296
|||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatatt----gaagactgaatgctgtgtgtagtggcctgagtagcctgccaagctggca 496
Query: 297 gggttttaatgcaggaggtggtgggacaagaaggccatg-agtggcttcctccatctgac 355
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 497 gggttttaatgcaggaggtggtggaacaagaaggccatgcagtggcttcctccatctgac 556
Query: 356 acgtcagagagaactctga 374
|||||||||||||||||||
Sbjct: 557 acgtcagagagaactctga 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 775
Length adjustment: 9
Effective length of query: 365
Effective length of database: 766
Effective search space: 279590
Effective search space used: 279590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_o14.g1 MSMg01no495_o14.g1 CHROMAT_FILE:
MSMg01no495_o14.g1 PHD_FILE: MSMg01no495_o14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:04 2005
(209 letters)
>mm_chr12_88467152_88467758
Length = 607
Score = 385 bits (199), Expect = e-111
Identities = 206/209 (98%), Gaps = 2/209 (0%)
Strand = Plus / Minus
Query: 1 aacagaaaccattccctctgtatgtgcagggcctacaggaccctgacatatgtgaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aacagaaaccattccctctgtatgtgcagggcctacaggaccctgacatatgtgaacaaa 348
Query: 61 tcccagtagataaactggaccttactttgtaagtgtgagccaaaatgttttagcttttat 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 347 tcccagtagataaactggaccttactttgtaaatgtgagccaaaatgttttagcttttat 288
Query: 121 gtatccttaatcatttgggttttttttttttgagaaacaatgcaaattccattcaaataa 180
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gtatccttaatcatttggg--ttttttttttgagaaacaatgcaaattccattcaaataa 230
Query: 181 ctcaaatattaccatagtttatgcagagt 209
|||||||||||||||||||||||||||||
Sbjct: 229 ctcaaatattaccatagtttatgcagagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 607
Length adjustment: 9
Effective length of query: 200
Effective length of database: 598
Effective search space: 119600
Effective search space used: 119600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
