ACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGCG
GAATTCTCTACATTCCAACATTCTCTACATAAAAAAACTGAATAAAATGT
GCAGCTGTCTACATCAATAAACTTCTGTAGAATGCTCTTTTCCTTACTCT
GATACTAGCTTGTTCTAGAGCCCTGGCTGTGTTCTTTGAGCTAAATAAGC
CTTCCTCCTTCCTGGGTAATGAAAAGATTGATACTCATGACCGTGGCTTT
GGGTGTAGGTCATGTAAGAGTAGACATCCCACCTGTCCTGCCTAAATTGA
ATGAACAGGAGATAGGACCATATTAATCACTTAGCACATCCTTCCGGCTG
AATTACTTGACCTACAGGAGAGTTGGACATTGCCTCCTTCCTGAAAGCCA
TCTGTTACCCTGCACACGCAGCCCTGGGGGCAGGGAGTAAGATAGGATAG
GCCAAGAAGACTTGGGAGCATTTTCCATGGCGGTCAAGAAAACACATCAA
AAGAACAGCCCTGTCTCCCTTCCTCTGCTCCCTCTGCAATTCCTTGAAGC
CAAGGGGAATGACATCACAACAAAACAGAGGAGTTGCCAAGACATACTCT
ACAAAATGTCCTCACATGGTTACATTTTCTGCAAATTACAGCGTTTGGAG
TATAAATCAGAGTAATTGTTTTAATCAGAGTGACTGTTGAAACAGATTTC
CAGTGATCAAATCAAAAAGGCATCATCCTGCGGTTCGTTCGGTGCTCATA
GCCCCACATACTTCTGAAAGTGCGGNTGTCAGTTAACTGG

CAACGGAGAAGAANNAAGATTCGGGNNNNNTTCCCCNAATCGNNCATCTG
CCNNGGNNNNNNNNNNNNTTGCGGATCACCCGCANGGGNNGNNNNNGNNN
NNNGGNNNGNGGGGNNNGGGGGGGGGTTTTTCCCCAAAAAAAAAAGGCGG
AGAAGGAGAGATGGAGTAGGAAAAAGATTAAGTCAGAGTAGGGGGATATA
AGCCCTAAAAGAAGTGAGAGAGAGACAACAACAAAACGAAGGGCTAGGGA
CCGAGGGGTGAAAGCCACGGAAAGCATTTTTTTGCGGGAAGGAGAAAATG
GATGGTCGGATAGGACACGTAGCGCGCGAAGCGCGAAAGGAACACGCCTT
TAGGTGATTTTGANAGAAAAAGCGCGAGGAACGAGAAGAGAGGTTTCTCT
CCCCCGTAAGAATGAGGAGAGCTTCGGCGTCTTCCTCCTTTGTCATTGGT
TTGTTCCCCCCCCCCCACCAANAAAATTATTTTGTTTATTAGAGAAAATA
GAAANAGTTCTTTAAATACACAACATTATACGGATATGCATAGGTGATCT
GAAATAAGTACACAAACTATGATACGACTCTTCAGCACCCTACCAATTCG
TATCAACTATGCGACATGGTCTTATCTCTTATTACATCTCCCAAACATCC
ACACGATATATAAGGTGAGAATGAGAAGGCAGTGTGGTAGAATTATAACT
CACCATTTAATATATAATCCCACCTCCCGTCTTCGTCGAATCGCCTATAA
CATAGATATTTTTGAGTCCCGTCCATGTGCGCTATGATTGACACCCCCCC
AATTCTTTTAATACGAACATTACTCCCCATCATATTGCACTCGAACAAAA
GTGTTAAATCTTCACACCATTATTGACACCCTTTCTTGCCTTTCTG

Query= MSMg01no496_o22.b1 MSMg01no496_o22.b1 CHROMAT_FILE:
MSMg01no496_o22.b1 PHD_FILE: MSMg01no496_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:26 2005
         (567 letters)



>mm_chr12_8062373_8063339
          Length = 967

 Score = 1050 bits (543), Expect = 0.0
 Identities = 561/567 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   attctctacataaaaaaactgaataaaatgtgcagctgtctacatcaataaacttctgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctctacataaaaaaactgaataaaatgtgcagctgtctacatcaataaacttctgta 260

                                                                       
Query: 61  gaatgctcttttccttactctgatactagcttgttctagagccctggctgtgttctttga 120
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatgctcttttccttgctctgatactagcttgttctagagccctggctgtgttctttga 320

                                                                       
Query: 121 gctaaataagccttcctccttcctgggtaatgaaaagattgatactcatgaccgtggctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctaaataagccttcctccttcctgggtaatgaaaagattgatactcatgaccgtggctt 380

                                                                       
Query: 181 tgggtgtaggtcatgtaagagtagacatcccacctgtcctgcctaaattgaatgaacagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggtgtaggtcatgtaagagtagacatcccacctgtcctgcctaaattgaatgaacagg 440

                                                                       
Query: 241 agataggaccatattaatcacttagcacatccttccggctgaattacttgacctacagga 300
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agataggaccataagaatcacttagcacatccttccggctgaattacttgacctacagga 500

                                                                       
Query: 301 gagttggacattgcctccttcctgaaagccatctgttaccctgcacacgcagccctgggg 360
           |||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 501 gagttggacattgcctccttcctgaaagccatctgttatcctgcagaggcagccctgggg 560

                                                                       
Query: 361 gcagggagtaagataggataggccaagaagacttgggagcattttccatggcggtcaaga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcagggagtaagataggataggccaagaagacttgggagcattttccatggcggtcaaga 620

                                                                       
Query: 421 aaacacatcaaaagaacagccctgtctcccttcctctgctccctctgcaattccttgaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaacacatcaaaagaacagccctgtctcccttcctctgctccctctgcaattccttgaag 680

                                                                       
Query: 481 ccaaggggaatgacatcacaacaaaacagaggagttgccaagacatactctacaaaatgt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccaaggggaatgacatcacaacaaaacagaggagttgccaagacatactctacaaaatgt 740

                                      
Query: 541 cctcacatggttacattttctgcaaat 567
           |||||||||||||||||||||||||||
Sbjct: 741 cctcacatggttacattttctgcaaat 767


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space:   533049
Effective search space used:   533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)